Aeromonas sp. ASNIH5: C2U30_04740
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Entry
C2U30_04740 CDS
T05873
Name
(GenBank) GGDEF domain-containing protein
KO
K18765
RNase E specificity factor CsrD
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aes03019
]
C2U30_04740
Messenger RNA biogenesis [BR:
aes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2U30_04740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AUT41069
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All DBs
Position
1077670..1079307
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AA seq
545 aa
AA seq
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MLNKHEGNLLLVSALVCIPMLLLQGVLLAPPASPLTLLLVLMTTLTGFALLLFLTHSVRR
GEKARQEQRWLLALQQRDPAMLDSVQAQTALRQLLASFNEAEIDAHRQITELHNQATRDE
MTGLGNRHAFRRDLTELLQQENTQTAILVLIRATELGTLNAQRGFQSGDAYIRDIAALIS
HTVSRFPGHRVYRISGADFAVLLPPLAQIPPHLLGRDLKLAFDRYQHDHELESAAYSGMT
RLSSEQKIEAILARADLALARAQTEVVNGWAIQQNDEVVEVQGQRHWTQVLTDLLEQESV
NFTCQPIQPLHRGMLAYHEIYPRFCSSDGTVLPSDTLLAMAQRLDMVLRLTQMVIRHVIR
QYRAFGGHNSRWGLNLPGSLLQNSAFLIWLDHQLQKDPDIGANLVFELDEEHLERNLTGS
RRLFELLRRHGSRSAICNFGKGIGSFSLFRELKPDYIKLDPGLITELEQDLTNQQFVRMI
VDVSHRMGCLVIAEGVEQIGQKQMLQSMYVDGLQGYLIARPQELGPEIGQMGIFTETVSA
STGSE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaacatgagggaaacctgctgctggtcagcgcactggtctgcattcccatg
ctgctgttgcagggagtgctgctcgccccccccgcctcaccgctcaccctgctgctggtc
ctgatgaccaccctgacgggattcgccctgctgctctttctcacccacagcgtgcgccgt
ggggaaaaggcgaggcaggagcaacgctggctgctggcgctgcagcagcgggatcccgcc
atgctcgacagcgtacaggcacaaacggctctgcgccagctccttgcatccttcaatgag
gccgagatcgatgcccaccgccagatcaccgaattgcacaatcaggcgacccgggacgag
atgacgggccttggcaaccgccacgccttccggcgcgatctgaccgagctgctgcaacag
gaaaacacccagaccgccatcctggtgctcatccgcgccaccgagctcgggaccctcaac
gcccagcgcggcttccagtccggagatgcctacatccgggacatcgccgccctcatcagc
cacaccgtcagccgcttcccgggccaccgggtctatcgcatctcgggggccgattttgcc
gtcctgctgccccccctggcccagatcccgccccatctgctgggacgggatctgaagctc
gccttcgatcgctatcagcacgatcacgagctcgagagcgccgcctactcgggcatgacc
cgcttgagcagcgagcagaagatagaggccattctggcccgggcggatctcgcgctggcc
cgcgcccagacagaggtagtcaatggctgggccatccagcagaacgacgaggtggtcgaa
gtgcagggtcagcgtcactggacccaggtgctgaccgatctgctggagcaggagagcgtc
aacttcacctgccagcccatccagcccctgcatcgcggcatgctcgcctatcacgagatc
tatccccgcttttgcagcagcgacggcaccgtgctgccaagcgataccctgctcgccatg
gcgcagcggctggacatggtactgcgcctgacccagatggtgatccgccacgtcatccgc
caataccgcgccttcggaggccacaacagccgatggggtctcaatctgccaggctccctg
ctgcaaaacagcgcctttctcatctggctggatcaccagttgcaaaaagaccccgacatc
ggggccaacctggtgttcgagctcgacgaggagcacctggagcgcaacctgaccgggtcc
aggcggctgttcgagctgctcaggcgccacggcagccgctcggccatctgcaacttcggc
aaggggataggctccttcagcctgtttcgcgagctcaaacccgactacatcaagctggac
cccggtctcatcaccgagctggagcaggatctcaccaatcagcagttcgtgcggatgatc
gtcgacgtctcccatcgcatgggctgcctggtgatcgcggaaggggtggaacagataggt
cagaagcagatgctgcagagcatgtatgtggacggcttgcagggctacctcatcgcccgg
ccccaggagctgggaccggagatcggtcagatggggatcttcacggagacggtttcagct
tcaacagggtcagaatga
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