Aeromonas sp. ASNIH5: C2U30_07410
Help
Entry
C2U30_07410 CDS
T05873
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aes03032
]
C2U30_07410 (topA)
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_07410 (topA)
Enzymes [BR:
aes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C2U30_07410 (topA)
DNA replication proteins [BR:
aes03032
]
Prokaryotic type
DNA Topoisomerases
C2U30_07410 (topA)
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C2U30_07410 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AUT41559
LinkDB
All DBs
Position
complement(1651268..1653889)
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSASTEPKKPVIRGIKLSES
EKAAKDRNALFSRMGINPTAGWQANYQILPGKEKVVSELQSLAAKADTIYLATDLDREGE
AIAWHLREIIGGDDSRYKRVVFNEITKSAIQEAFAQPSELNIHRVNAQQARRFLDRVVGY
MVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFVPVEFWDLNADLLTADKSDLRME
VVSRNGADFKPVTQAETFAAVAALEGVDYKVVNREDKPTGSKPSAPFITSTLQQAASTRL
SFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVEAVREYIGEQYGAAYLPSEPNLYGA
KANAQEAHEAIRPSSVQVTAEMLEGMEPDAMRLYDLIWRQFVACQMTPAQYDSSTLTVKA
GEFELKARGRTLRFAGWTKALPPMGRKGEDSQLPAVTVGEVLKLVKLDPRQHFTKPPARF
TEAALVRELEKRGIGRPSTYASIISTIVDRGYVRVESRRFFAEKMGEIVTDRLVENFVEL
MNYEFTAKMEDKLDGIAEGSLEWKKVLDAFYAEFTQELEQADKPHEEGGMRANQMVLTDI
DCPDCGRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVSADEFVSATDGDEAETDALR
AKHRCGICGTAMDAYIIDDSRKLHVCGRNPDCDGYEVEQGQFKLKGYEGPSIECDRCGSE
MQLKNGRFGKYMGCTNESCKNTRKILKNGDIAPPKEDPVPLPELKCTQSDAHFVLRDGAA
GLFLAASNFPKSRETRAPLVEELKRFRDRLSPKHQYLADAPASDPDGNASVVRFSRKTKE
QYVMTEVNGKATGWTAHYDNGKWQESLPKAKKA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcactggtcatcgtggagtctccggccaaggccaagaccatcaacaaatat
ttgggcaaggactacgtggtgaaatccagcgtaggccacgtgcgcgatctgccgaccagc
ggcagcgccagcaccgagcccaaaaaacctgtcattcgcggcatcaagctcagcgaatcc
gagaaggcggccaaggatcgcaacgccctgttctcaaggatgggcatcaacccgaccgca
ggctggcaggccaactaccagattttgcccggcaaggaaaaagtggtcagcgagttgcaa
agtctggccgccaaggccgacaccatctatctcgcaaccgacttggatagagagggggaa
gcgatcgcctggcacctgcgcgagatcatcggtggcgacgacagccgctacaagcgcgtg
gtgttcaacgagatcaccaagagtgccatccaggaggcgttcgcccagccgtccgagctg
aacattcatcgcgtcaacgcccagcaggcccgtcgtttcctcgaccgggtggtgggctac
atggtctccccgctcttgtggaagaagctggcccgcggtctctccgctggtcgagtgcag
tccgttgcggtgcgtctcatcgtcgataaagagcgcgaaatcaaggcgttcgtaccggtc
gagttctgggatctcaatgccgacctgctcaccgccgacaagagcgatctgcggatggaa
gtggtcagccgcaatggtgccgacttcaagccggtgacccaggccgagaccttcgccgct
gttgcagccctggaaggggtcgactacaaggtcgttaaccgggaagacaagccgaccggc
tccaagccgtccgcgccgtttatcacctccaccctgcagcaggcagcctctacccgtctg
agcttcggggtcaagaaaaccatgatgatggctcagcgtctctatgaagcgggttacatc
acctatatgcgtaccgactccaccaacctcagcaaagaggcggttgaggcggtgcgtgaa
tatatcggcgagcagtatggcgcggcctatctgccgagcgagccgaacctctacggcgcc
aaggccaatgcccaggaagcgcacgaggcgatccgcccctccagcgtccaggtgactgcc
gagatgctggaagggatggagccggatgccatgcgtctgtacgacctcatctggcgtcag
ttcgttgcttgccagatgaccccggctcagtacgactcctccaccctgaccgtcaaggcg
ggtgagttcgagctcaaggcccgtggtcgtaccctgcgcttcgccggttggaccaaggct
ctgccgccgatgggtcgcaagggcgaagacagccagctgccggcggtgaccgtgggtgag
gtgctgaaactggtcaagctggatccgcgccagcacttcaccaagccgcctgctcgtttc
actgaagcagcgctggtgcgtgagctggaaaaacgcggcatcggccgtccgtcaacctac
gcttccatcatctccactatcgtcgaccgtgggtatgtgcgggtcgagagccgccgcttc
ttcgccgagaagatgggggaaatcgtcaccgaccgcctggtggagaacttcgtcgagctg
atgaactacgagttcaccgccaagatggaagacaagctcgacggcatcgccgaggggagc
ctggagtggaagaaggtgctcgacgccttctacgccgagttcacccaggagctggagcag
gccgacaagccccatgaagagggaggcatgcgtgccaaccagatggtgctgaccgacatc
gactgcccggattgtggccgcaagatgggtatccgtaccgccaccaccggcgtcttcctc
ggctgctccggctatgccctgccgcccaaggagcgctgcaagaagaccatcaacctggtc
agtgcggacgagttcgtctccgccactgacggggacgaggcggaaaccgatgccctgcgt
gccaagcatcgctgcgggatctgcggcaccgccatggacgcctacatcatcgacgacagc
cgcaagctgcacgtctgcggtcgcaacccggattgcgatggctacgaggtggagcagggg
cagttcaagctcaagggctacgaagggccgagcatcgagtgcgatcgctgcggctccgag
atgcagctcaagaacggccgtttcggcaaatacatgggttgcaccaacgagagctgcaag
aacacccgcaagatcctgaaaaatggcgacattgcgccgccgaaagaggatccggtaccc
ctgcccgagctgaaatgcacccagtccgacgcccacttcgtgctgcgggacggcgccgcc
ggcctcttcctggccgccagcaacttccccaaatcccgcgagacccgtgcgcccctggtg
gaggagctcaagcgcttccgcgatcgcctctcccccaagcaccagtacctggcggacgcc
ccggcgtcagatcctgacggaaacgcctccgtggtgcgcttcagccgcaagaccaaggag
cagtacgtgatgaccgaggtcaacggcaaggcgaccggctggacagcccattacgacaac
ggaaaatggcaggagagcctgcccaaggcgaagaaagcctga
DBGET
integrated database retrieval system
