Aeromonas sp. ASNIH5: C2U30_11650
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Entry
C2U30_11650 CDS
T05873
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aes03016
]
C2U30_11650
Enzymes [BR:
aes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2U30_11650
Transfer RNA biogenesis [BR:
aes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U30_11650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AUT42293
LinkDB
All DBs
Position
2504830..2506851
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQAVTRFVGRVKMFRDRLNVVPDHPLIKDAIKARAKKGLDE
KSFKEGDWVVATLKRHALVDGNFSAEITQLIATQEDHNVPWWVVLARHNLAQIEPADLPE
WKVIEEEELPRRDLTQVPFFTIDGAKTKDMDDALAITKLENGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARIVSHARLSYDDVSDWAEHGKALDIDAGVLAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGEDGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKEVGYGIFNVHTGFD
EESLDGAIELLKTAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVDLVPGPAPVAPASE
ADAAPADEAPKAQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgcactgaaaaagagaaagaggtggccgagccggatgccctgctggag
caggccgttacccgcttcgtcggccgcgtgaagatgttccgcgaccgcctcaacgtggtg
cccgaccaccccctcatcaaggacgccatcaaggcccgcgccaagaagggtctggacgag
aagtccttcaaggaaggggactgggtggttgccaccctcaagcgccatgccctggtggac
ggcaacttctccgccgagatcacccagctcatcgccacccaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccagattgaaccggcggacctgccggag
tggaaggtgatcgaagaggaagagctgccccgccgggatctgacccaggttcccttcttc
accatcgacggtgccaagaccaaggacatggacgatgccctggccatcaccaagctggag
aacggctgggagctgctggtggccatcgccgacccgaccgcctatgtggccgaggggagc
gagctggacaaggaggccgcccagcgcgccttcaccgtctacatgccggggcgcaacgtg
cccatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgcgcccgtctgctcatcgccgaggatggcctgctgctggaggagaccgag
ttcttcgccgcccgcatcgtctcccatgcccgtctcagctatgacgacgtctccgactgg
gccgagcacggcaaagcgctggatatcgacgccggcgtcctggcccagctgcccctgatg
aaggcgatgacggaggcccgcatcaagtggcgcaccgagcacgccctggtgttcccggac
agacccgactacgacttcgagctgggtgaagacggcgaagtgctggccatccacgtggag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctgggcaaagaggtcggctacggcatcttcaacgtccacaccggctttgac
gaggagtccctggacggcgccatcgagctgctcaagaccgccgaggccccgttcgagaag
gaagagatcgccagcctctccggcttctgcgccctgcgacgctggatagacaacctggac
acccgctggctggacggcaagatccgccgcttccagagctatgccctgatgtccgccgaa
ccgggtgcccactacggcctgggtctggatgcctacgccacctggacctcccccatccgc
aaatacggcgacatggtcaaccatcgcctgctcaaggcggtcatcgccggcaagaccccg
ggtgagcgccccagcctggagctgaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtgcgctacctcaaggccgatgcgggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgc
ctgcaggagaacggcgccgtggtcttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaacggccgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtgaagctgaccgaggcggtggaagagacccgctccctc
atcgccaagccggcggtggatctggtgccgggtccggcgccggtcgctcctgccagcgag
gccgatgcagcgcctgccgacgaggcccccaaggcgcagtga
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