| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aes00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U30_13180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:aes03019]
C2U30_13180
03400 DNA repair and recombination proteins [BR:aes03400]
C2U30_13180
Enzymes [BR:aes01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U30_13180
Messenger RNA biogenesis [BR:aes03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2U30_13180
DNA repair and recombination proteins [BR:aes03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U30_13180
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2835984..2837819)
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| AA seq |
611 aa
MTAIAETLPDPQPETPLALLQAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCY
QIPALLRPGLGVVVSPLISLMKDQVDTLRANGVAAAYINSALSREEMIQNFAAMRRGEIK
LVYVSPERLLQHEFMDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPV
VALTATADEATRSDMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGN
CGIVYCSSRNRVEEVAERLSRHGCKAAPYHAGLPLEQRQQAQEAFLKDDIEIVVATVAFG
MGIDKPNVRFVVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLDNIEN
PQQLQVEQYKLNVMAAFAEAQTCRRQVLLNYFGEYNDKPCGNCDICLDPPKSYDGTEDAQ
KALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHEYWMSVIRQLI
HKGLLTQNITRNLVLQLTEAARPVLRGEVKLELAVPRLQPISSRKEKRNGLLDNANYDKR
LFKELRALRKQIAEDEEVPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEA
FMDLIIDYCRR |
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| NT seq |
1836 nt +upstreamnt +downstreamnt
atgactgcgattgccgaaaccctgcctgaccctcagccagagacaccgctagccttgctg
caggcggtcttcggctatcagcaatttcggccgggccagctcgagattatcgagcagata
gtggcggggcgcgatgccctggtgctcaaacccaccggcggcggcaagtcgctctgctac
cagatcccggcgttgttgcgaccggggctcggggtggtggtctctcccctcatctcgctg
atgaaggatcaggtcgacaccctgcgtgccaacggtgtggcggcggcctacatcaactcg
gccctgagccgggaggagatgatccagaactttgccgccatgcgccgcggcgagatcaaa
ctggtttatgtttcccccgagcgtctgctgcagcatgagttcatggaccggctggccgag
ctgccgctcggtctgttcgccatcgacgaggcgcactgtgtttcccagtgggggcacgat
tttcggccggaatatgcggcgctgggccggctcaagcagtggttcccccaggtgcccgtg
gtggcgctcaccgccaccgccgacgaggcgacccgcagcgacatgctgcaccggttggag
ctcaacgatccctttatccacaccgccagcttcgaccggcccaacatccgctacagcctg
gtggaaaagttcaaggcggccgagcagctgctgcgctatgtgcagagtcaaaagggcaac
tgcggcatcgtctactgctccagccgcaaccgggtggaggaggtggccgagcggctctcc
cgtcacggctgcaaggcggctccctatcatgccggcctgccgctcgagcagcgtcagcag
gcccaggaagccttcctcaaggatgacatcgaaatagtggtggcgacggtggcattcggc
atggggatcgacaagcccaacgtgcgtttcgtggtgcactacgacatccccaagaacatc
gaatcctactatcaggagaccggtcgcgccggccgcgatggcacccccgccgaggcgctg
ctgctctacgatcccgccgacatcggccgggtgcgccgcctgctcgacaacatcgagaat
ccccagcagctgcaggtggagcagtacaagctcaacgtgatggcggcctttgccgaggcg
cagacctgccggcgccaggtgctgctcaactacttcggtgagtacaacgacaagccgtgc
ggcaactgcgacatctgcctcgatccgcccaagagctatgacggcaccgaagacgcccag
aaggcactctcctgcgtctggcgggtgggccagaacttcggagtaggctatgtggtggag
gtgctgcgcggctcgctcaatcagcgcatcaaggatcacggccacgacaagctctcgacc
tacggcatcggcaaggatcagagccacgagtactggatgagcgtgatccgccagctgatc
cacaaaggcctgctgacccagaacatcacccgcaacctggtgttgcagctgaccgaggcg
gcccgccccgtgctgcgcggcgaggtgaagctggaactggcggtaccccgcctgcagccc
atctccagtcgcaaggagaagcgcaacggcctgctcgacaacgccaactacgacaagcgg
ctgttcaaggagctgcgcgccctgcgcaaacagatcgccgaggatgaagaggtgccgccc
tacgtggtgttcaacgatgcgaccctggtggagatggcacagctcatgccgatgacggaa
gacgaaatgctggcgatcaacggcgttggccaccgcaagctggaacgcttcggtgaagcc
tttatggacctgataatcgactactgccggcgctag |
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