Aeromonas sp. ASNIH5: C2U30_16230
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Entry
C2U30_16230 CDS
T05873
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aes03019
]
C2U30_16230
Messenger RNA biogenesis [BR:
aes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2U30_16230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
ARM_ECM29
Motif
Other DBs
NCBI-ProteinID:
AUT43068
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All DBs
Position
3453403..3455322
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AA seq
639 aa
AA seq
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MKLTTQLVSFITLCVISAMAMVMLGGVFSFRQMGMELQQNRVDSLVEIIDKQLGVTDDQQ
ALARWLPSLLRASHVVELEIRQDKQRVYWFRDVQQQTDESLLIAYSEAIPNQAGMRADFK
LDRPFKEFEYSMKAMFGISLGIFIVVFGLWYSIRWLRLQLRGAELLAERAQLILDGKLTK
LAHDPAEEWPVSASQALTHLLTELADARKERSRFDNFIRSNAFVDKTTGIGNRLFFDNRL
ESAIMEASVISGGVLLIELAGLEELDPELSGRPSQELLMEASATIGAFVRKHSGALQARY
AGQVFAVLLPNMSESEMVDGASQLLKSLQRLHWPEAVNADTAVYLGAVCYQAQDSLLKVQ
EEAELALKSARLQGHSGWFLFEKSLNEEASSKGTVRWRTLISRRIEEQGIDFYVQPVQQE
RDQVVLQQELLIRLHDEQGRELQAGVFMPMAEKAGLLLPLDRLVVARALRLLRQRPASSC
PISLSLCAQNLLTREFQRELFFELFQLPRSTNEGLILQLSESQVTRHYEALKRPLRAMRM
LGCRLAIDHAGQDVVSTQYIKEFEIHFLKLHPSLVREIHLRQVNQMAVRSLVGGCANTQT
RVIAVGVESGDEWKMLRHLGVHAGQGPWFADPEPLNLPD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccactcaactcgtctcttttattacgctgtgcgtgatctcggccatggcc
atggtgatgctcggcggggtcttcagttttcgccagatgggaatggagctgcagcagaac
cgtgtcgactccctggtggagatcatcgacaagcaactgggggtgaccgatgaccagcaa
gcccttgcccgctggctgccctccctgttgcgggcctcccatgtggtggagctggagatc
cgtcaggacaagcagcgggtctactggtttcgcgatgtgcagcagcagacggacgagagc
ctgctgatcgcctacagcgaggcgatccccaatcaggccgggatgcgggccgacttcaag
ctggacaggccgttcaaggagttcgagtactccatgaaggcgatgttcggcatctctctg
ggtatcttcatcgtggtgttcgggctctggtactccatccgctggctgcgtctgcagttg
cgcggtgccgagctgctggcggagcgtgcccagctgatcctggatggcaagctgaccaag
ctggcccatgaccctgccgaagagtggcctgtttcggccagtcaggccctcacccatctg
ctgaccgagctggccgacgcccgcaaggagcgcagccgctttgacaacttcatccgcagc
aacgccttcgttgacaagacaacgggcatcggcaaccgcctcttcttcgacaaccggctg
gagagcgccatcatggaagcaagcgtgatcagcggcggtgtgctgctgatcgagctggcc
ggtctggaggagctggatcccgagctgagcgggcgcccgagccaggaactcctgatggag
gcgagcgccaccatcggcgccttcgtgcgcaagcacagcggagccctgcaggcgcgctat
gccggtcaggtctttgccgtgctgctgccgaacatgtctgagagcgagatggtcgacggc
gccagccagttgctcaagagtctgcaacgactgcactggcccgaagcggtcaatgccgac
accgccgtctatctcggtgcggtctgctatcaggcacaggattccctgctcaaggtgcag
gaagaggcggagctggcgctcaagagcgcgcgcctgcaaggacacagcggctggttcctg
ttcgagaaatccctcaacgaggaggcgagcagcaagggaacggtgcgctggcgcaccctg
atcagccgtcgcatcgaggagcagggcatcgacttctacgtccagcctgtgcagcaggag
cgggatcaggtggtgttgcagcaggagctgctcatccgccttcacgacgagcagggccgg
gagctgcaggcgggggtcttcatgcccatggcggagaaggccggtctgctgctgccgctg
gacaggctggtggtggcccgagccttgcgactgctgcgccagcgaccggcatcgagctgc
cccatcagcctctctctgtgcgcccagaacctgctcacccgcgagttccagcgcgagctc
ttcttcgagctgttccagttgccgcgcagtaccaacgaggggttgatcctgcagttgtcg
gagtcccaggtgacccgccactacgaagccctcaagcggccgcttcgggcgatgcgcatg
ctggggtgcaggctggccatcgatcatgcgggccaggacgtggtgagcacccagtacatc
aaggagttcgagatccacttcctcaagctgcaccccagcctggtgcgggagatccacctg
cgccaggtcaaccagatggcggtacgcagtctggtggggggctgtgccaatacccagacc
cgggtcatcgcggtgggggtggagagtggcgacgagtggaagatgttgcgacacctgggc
gtgcatgccggtcaaggtccctggtttgccgaccccgagcccctcaacctgcctgactag
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