Aeromonas sp. ASNIH5: C2U30_18290
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Entry
C2U30_18290 CDS
T05873
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aes
Aeromonas sp. ASNIH5
Pathway
aes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U30_18290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_18290
Enzymes [BR:
aes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U30_18290
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U30_18290
RecFOR pathway proteins
C2U30_18290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_22
AAA_3
Mg_chelatase
nSTAND3
AAA_14
Rad17
AAA_18
AAA_2
AAA_17
NTPase_1
RNA_helicase
TIP49
TniB
Bac_DnaA
AAA_28
AAA_24
ABC_tran
Sigma54_activ_2
TsaE
NB-ARC
bpMoxR
NPHP3_N
CagL
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AUT43434
LinkDB
All DBs
Position
3883148..3884158
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLISAGAAREDEIIDRAIRPRKLADYTGQDHVCDQMEIFIEAARQRGEALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLEPNDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVKDLTDIVSRSARCLGLDMTEDGALEVARRSRGTPRIANRLLRRVRDFAQVKSDG
RIDGPIAARAMDMLDVDNEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEEKDTIEDV
LEPYLIQQGYLQRTPRGRIATQRAYVHFGLERPADQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcggatcgcctcatctcggccggtgccgcccgtgaggacgagatcatcgat
cgggccatccggcccagaaagctggccgattacaccggacaggatcacgtctgcgatcag
atggagatcttcatcgaggccgcccgccagcgcggggaggccctcgatcatctgctgatc
ttcgggcctcccggccttggcaagaccacgctggccaacatcgttgccaacgagatgggg
gtcaacatcaagaccacctcgggccccgtgctggagaaggccggcgatctggcggcactg
ctcaccaacctcgaaccgaacgacgtgttgttcatcgacgagatccaccgccttagtccg
gtggtggaggaggtgctctacccggcgatggaggattatcagctcgacatcatgataggg
gaggggccagcggcccgctccatcaagctcgatctccctcccttcaccctgatcggtgcc
accacccgggccggctccctcaccagccccctgcgtgaccggtttggcatcgtgcagcgc
ctcgagttttacaacgtcaaggacctgaccgacatcgtctctcgcagcgcccgctgcctc
gggctcgacatgacggaagacggcgctctcgaggtagcccgtcgctcccgggggacaccg
cgcattgctaaccgtttgttaaggcgggtacgagattttgcccaggtgaagtctgacggg
cgaattgacggacccattgcggcccgtgccatggacatgctggacgtggacaatgaaggt
ttcgacttcatggatcgcaagctattgttggccgtcatcgacaagtttatgggggggccc
gtcgggctcgacaacctggccgccgccatcggtgaggagaaggacaccatagaagacgtg
ctggaaccttatctgatccagcaaggctatctgcaacgtacacccagagggcggatcgca
actcagagagcctacgtacactttggtctggaacgaccggcagatcagtag
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