Aeromonas sp. ASNIH5: C2U30_20570
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Entry
C2U30_20570 CDS
T05873
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aes
Aeromonas sp. ASNIH5
Pathway
aes03030
DNA replication
aes03430
Mismatch repair
aes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U30_20570
03430 Mismatch repair
C2U30_20570
03440 Homologous recombination
C2U30_20570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aes03032
]
C2U30_20570
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_20570
Enzymes [BR:
aes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U30_20570
DNA replication proteins [BR:
aes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U30_20570
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U30_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AUT44442
LinkDB
All DBs
Position
4346233..4349712
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPRFIHLRVHSDFSMVDGLQKIGPIVSAAAANNMPALALTDQMNMCGLVRFYGSAHGK
GIKPLVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LGEHAKGVIVLSGGREGDVGKFLLKGNRQMVEHCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFELPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKKSFALL
QRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIEAILDARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSSELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDERFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccccgtttcatccacctgagggtgcactccgacttctccatggtcgacggc
ctgcagaagatcggtcccatcgtctccgctgccgccgccaacaacatgccggccctggcc
ctgaccgaccagatgaacatgtgcggcctggtgcgcttctacggctctgcccacggcaag
gggatcaagcccctggtcggggcggatttctgggtgcagagcgacgagcttggggacgag
cagtttcgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggccatgtgcaggggcgccccgtcatcgacaaggcctgg
cttggcgaacatgccaagggggtgatcgtcctctccggcgggcgcgagggggatgtgggc
aagttcctgctcaagggcaaccgccagatggtggagcattgcctcgccttctaccagacc
cacttcccggatgcctactacctggagctgctgcgtaccggccgcccggacgaggaggtc
tacctgcacatggcggtggccattgccaccgagttcgaactgccggtagtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgatgcccacgagatccgggtcgccatccac
gacggctacaccctgatggacaagcgccgaccgcgccgctacagcccccagcagtacctg
cgcagtcaggaggagatggcggagctgtttgccgacatcccggaagccctggaaaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttccccaccggcgacatgaccaccgaggacttcctggtcatgaagtcgaaggaagggctg
gaggagcggctggagttcctgttcccggatccggcggtgcgggccgagcgtcgtcccgag
tatgacgagcgtctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgtcggtccg
ggccggggctcgggggcggggtcgctggtggcctacgccctcaagatcaccgacctggat
ccgctggaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtctccatgccc
gacttcgacgtcgacttctgtatggacaggcgcgacgaggtgatcgatcacgtctccgag
atgtacggccgggaggcggtgtcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtcggccgggtgctgggccacgcctacggctttgtcgatcgcatctcc
aagctgatcccgcccgaccccggcatgaccctcgccaaggcgttcgaagccgagcccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcccgccgc
ctggaaggggtggtgcgcaacgccggcaagcacgccggtggcgtggtgatcgcgcctacc
aagatcaccgacttcgcgccgctctattgcgacgacgaggggcatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctggggctgcgc
accctcaccatcatcgattgggcccttggcatgataaacccccgtcttgccaaagagggc
aagccgccggtggacatcgccgccatccccatcgacgacaagaagtcgttcgccctcttg
cagcgtttcgagaccacggcggtgttccagctcgaatcccgcggcatgaaggatctcatc
aagcggctgcagcccgactgcttcgaagacatgatcgcgctggtggccctgttccgtccg
ggcccgcttcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctacccggacgagaagtggcagcacgaaagcctcaaacccatactcgagcccacc
tacggcatcatcctctaccaggagcaggtgatgcagatcgcccagaccctggcggggtat
accctgggtggcgcggacatgctgcgccgggccatgggcaagaaaaaacccgaagagatg
gccaagcagcgggcgggcttcgaggagggggcggtcaagaacggcgtcgacggcgaactg
gcgatgaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaagtcccac
tccgctgcctatgcgctggtctcttaccagaccctctggctcaagacccatttcccggcg
gagttcatggcggcggtgatgaccgcggacatggacaacaccgacaagatagtgaccctg
gtggacgagtgtcagcgcatggggctgaccgtgatcccgccggacgtcaacaccggtcgc
taccgcttcagcgtcaacgaggacggccacatcgtctacggcatcggcgcggtgaagggg
gtaggggaagggcccatcgaggcgatcctggacgcgcgggatcgggacggtccgttccgc
gacctgttcgatttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcatcctctccggcgccatggacaggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcacgccaaggcccaggcggtggggcag
gtcgacatgttcggcgtgctcacggaggagatcgacgacgtcaagaaggcgttcgccaac
gtgccgcactggcccgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcagcgagctgcggcgctacacctcgggccga
ctgtgcgatctgcatcccacctcccgggatacggtgaccacggcggcggggttggtgatc
gcggcgcgcagcatggtgaccaagcgcggcaacaagatggggatcttcactctggacgac
agatccggccgtctggatgtgacccttttcagtgaagcgctggaaaaatacgaagaattg
atgcaaaaagaccgtattttagtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgcgagttgctggatatcaacgatgcgagggagcgttttgcc
agggcaatccgcatctccctcgatgaacaacgcattgacgagcgctttttcccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgc
cccggttcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgagtcctgcttggacgagagcgggttgaattggtttttgattag
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