Aeromonas sp. ASNIH5: C2U30_21270
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Entry
C2U30_21270 CDS
T05873
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_21270
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U30_21270
Archaeal homologous recombinant proteins
C2U30_21270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUT43947
LinkDB
All DBs
Position
4503176..4506931
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQKLAAISQRLGDVALMDEATREQWV
SQQISLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEAAHGAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKAQAELGPELGKLEEKTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQCQQVEQ
LKGQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLVRSQQQLREAQLGQQQLQAVRQQLSQLVSQHQQFEQQWQEADRQRIALE
GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIALV
ESRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKGRRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPPELDSRLTALEAHCRALDEQLFQCKSALAQAEAAALKAGTLQEELAAQ
QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALASLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccggtcaattcaccatc
gattttgccggtggcgctctgggggctgccggcctgtttgccatcaccggcaataccggc
gcgggcaagagcaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
tttatcgccaatcgcaagaatgtcgccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggccacgccagcggttttgccgaggtg
cagtttcgcggctgtgacggccgcatctggctggcccgctgggcggtgcgccgggcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcctgggagcagtttcgccgcgccgtcatcctgccgcagggggagtttgccgccttccta
aaatcgagcgccgatgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgccatttcggtccagacccatgagcgggcgcgggaggagcagcagaaactggctgcc
atcagccagcggctcggtgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcagataagccttgccaccagcctcaagcacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgcatcgccgcccagttgcaggcctgtcaggaggga
gaggcggctcttgccgcagccgaggcggcccacggtgcggccgcccccgagcgcgaggag
ttcgcccgcgctgagcaagcccaggtggcccgcgcggatcacgacgagctggctcgcctc
accctggaggtgcagcagcaggagaaggcgcaggccgagcttggccctgaacttggcaag
ctggaggagaagacccagcagagcgccctcaccgaacagcaactgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcctgaactcaaacgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagctcaccctggagcagggctggcgccagcagtgccagcaggtggagcag
ctcaagggccagcaccagcagtggggtgcctggcttgaggagcacaaggagctggcgccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aggctgcagcaactgctcaccctgcgcgaacacaagctgcgcgccctcaggcagttgcaa
catcagctggaacaggggcagcaggagcgcgactattggcagcgcgagcaggagcgactg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggccaaggcgcag
gagcagtggcaagggcagactgagcagctgggccagctgcgccagctgttggagctggcg
gactatggccgcaatcacggtgagcagcatggtcgcctgcagcaggagatcgcccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccggcccgcgagcgg
ctcgccctgcaacgggacgaggcgcgccatgcgctggagcagtcccgcgccatcgccagt
ttcgagcagcatcgccacatcctgcgcgacggtgaaccttgcccgctctgcggcgccgag
gagcacccctatcaccagagccagccacaggtggccggcattctggggcagttggcggag
cgcgtccgcagcctggagctcgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgccagctggcggtgcgccagcagcatctgcctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctcggcggtgccgagctgctg
ggccatccgctgccgctgcgtcagagcccgatcgagtggaacgagttgatgagtaccctg
ctcggccgcggccagagtctggagcaggggctggtccgcagccagcagcaactgcgcgag
gcccagctcggtcagcagcagttgcaggccgtgcgccagcagctgagtcagctggtcagc
cagcaccagcagttcgagcagcagtggcaggaggccgaccgccagcgcatcgccctggaa
ggggaggtgaaggcaatgggcgagcaggaaacgaccctgcgccagcgccttgagcaggga
ggcagccgactcgatgagcagatgggaggccagccctggcgccagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggccagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgtctg
cagacccagcgcgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cgacaggggctggtcaccagccgtgccacctgtctggggggcgaggagattgccctggtc
gagagccgctggcagcagcggctgcagcagctggccagcgagctggagacgatgcagggg
gcggcccgcgccctgcgcgagcgtcagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggggcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttaaccgagcggcagcgggcgctggcactggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccgccggagctcgacagccggctgacg
gcgctggaggcgcactgccgcgctctcgacgagcagctgttccagtgcaagagcgcgctg
gcccaggccgaggcagcggccctcaaggcgggcaccctgcaggaggagctggccgcccag
caggcggtggcggatcactggcagcgcctctgtgaccttatcggctcggccagcggcgcc
aagctgcgtaccttcgcccagagcctcacgctggagcggctgctgctggaggccaacgcc
cagctcgccgagctctccccccgctatcggctggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggatgaggtgcgctcggtggactccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcacgg
cagacccaggtcgagtcgctgttcatcgacgaagggtttggcaccctggatccggacagt
ctggatctggcgcttgccagcctcgattccctgcaggcggccggtcgccagatcggggtc
atctcccacgtgcagaccctggtggagcggatcggtgtgcaggtgagggtggaggccctc
ggcggcggcgaaagccgggtggtgttgcccggctga
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