Aestuariibaculum sp. YM273: RBH94_00925
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Entry
RBH94_00925 CDS
T09314
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBH94_00925 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_00925 (priA)
Enzymes [BR:
aest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBH94_00925 (priA)
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBH94_00925 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
AAA_22
Nrap_D6
ATPase_2
Zn_Ribbon_TF
AAA_11
Zot
AAA_19
T3SS_CopN_3rd
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WMI65739
LinkDB
All DBs
Position
complement(239800..242256)
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AA seq
818 aa
AA seq
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MQHFIDVIIPVPLQKLFTYSITAAESNFLKVGMRVSVPFGKSKIYTGIVYKIHSEAPEVY
EAKDIHQILDDTPIINEQQLRLWQWIASYYMCTLGDVMRAALPSAFILESETIISKNTQK
KIDESILKDDEFLVFDALQFQSSLKIHDISNILGIKNALPIIKRLIEKEVILVEEEVYEK
YKPKLVRYVRLHNSYTSEVDLHQLLDDLSRAPKQHKVIMTLFSLSASTKKPIKVADLTKA
SEASSSIIKALIDKGILEEYYIQTDRVEYEGDGNNEYTKRLNEYQDAALTEIKEAFKTQS
VVLLHGVTSSGKTEVYVKLIEEALSRDEQVLYLLPEIALTTQLITRLQNYFGEQVSVFHS
KYSTHERAEVWNNVLNNSHKAQVVLGARSSIFLPFNNLGLIIVDEEHEQSFKQFDPAPRY
HARDTAIVLAHLYQAKTLLGSATPSLESYFNAKQHKYGLVEITKRYNNVLMPDMELVDIK
DKHKRKKMKGHFSDRLIEEMTDALSEGFQVILFQNRRGFSPIVECNTCGHSPQCPNCDVS
LTYHRYKNQLRCHYCGYVMAMQDNCMACGSPEIDSKGFGTEQIETEVKNLFPDYKVARMD
LDTTRGKYGYEKIISALEQQEIDILVGTQMLTKGLDFRNVKLVGVMNADNMLNFPDFRAH
ERSFQLILQVAGRAGRTDQRGKVLIQSYNPHHNILQQVSTNDYLSMYNEQMDERYNFKYP
PIYKQIKITLKHKDYLNVENASIWYAKSLRNAFGDYVLGPESPPVARIRNQFHKNILVKI
PKKQSLAKTKEAITKINNSFLSIKDFRSVKVVLNVDNF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattttatagatgttattattcctgtaccgctacagaagttatttacttatagc
attacagcagctgaatccaattttttaaaagttggtatgcgcgtgtctgtaccttttgga
aaatcgaaaatttacacgggtatagtttataaaatacatagcgaagctcccgaagtctac
gaggcaaaagatattcatcaaatattagatgacacgccaataattaacgaacaacaacta
cgtttatggcagtggattgcgagttattatatgtgtacgctaggtgatgttatgcgagcg
gctttgccaagtgcttttattttagaaagtgaaacaattatttctaagaacacgcaaaag
aaaattgatgaatctattttaaaagatgatgagtttctggtgtttgatgcgcttcagttt
cagtcgtcattaaagattcatgatatttccaatattctgggaattaagaatgctttgcct
ataataaaacgtcttatagaaaaggaagttattttggttgaagaggaagtgtatgaaaag
tataaacctaaattggtacggtacgttagacttcataacagttacacttctgaagtcgat
ttgcaccagttgttagatgatttaagtcgtgcgccaaagcagcacaaagttattatgacg
cttttttcactgtcggcctctaccaaaaaaccgattaaggtagccgatttaaccaaggct
agtgaggcatcatcatctattataaaagctttaatagataaaggtattcttgaagaatat
tatatccaaaccgacagggtggagtacgaaggtgatggaaacaatgaatatacaaaacga
ctaaatgagtatcaggatgcggcgttaacagaaataaaagaagcgtttaaaacgcagtct
gttgttttattgcatggtgtaacttcgtcaggtaaaactgaggtttatgttaaattaata
gaagaagcactgagtagagatgaacaggtgttgtatttgttgcctgaaatagctttaacc
acacaattaattacacgacttcaaaattacttcggagaacaggtgtctgtgtttcactca
aaatattcaactcatgaacgtgctgaggtttggaacaatgttttaaataatagtcacaaa
gcccaggtagttttaggggcacggtcgtcaatatttttacccttcaataatcttggccta
attatagtcgacgaagagcatgaacagtcttttaaacaattcgatccggcgccacgatat
catgccagagatacagcaattgtattggcgcatttatatcaggctaaaacgcttttaggt
tcggcaaccccaagtctggaaagttattttaatgcgaaacaacataagtatggtttagta
gaaataaccaagcgttataataatgtattgatgcccgatatggagttagttgatattaag
gacaagcataagcgaaaaaagatgaaagggcatttcagtgatcggttgatcgaagaaatg
acggatgcgcttagtgaaggttttcaagtgattttatttcaaaaccgtcgcggattttcg
ccaattgtagagtgtaatacctgtggtcactccccacaatgccctaactgtgatgtgagt
ttaacctatcatcgatataaaaaccagttgcgttgtcactattgtgggtatgtcatggcg
atgcaggataattgtatggcttgtggaagcccggaaatagatagtaaaggatttggaacc
gaacaaatcgagaccgaagtgaaaaatttgtttcctgattataaagtggctcgaatggat
ttagataccactcgtggaaaatatggttacgaaaaaattatttccgctttagaacaacag
gaaattgatattctggtcgggacccaaatgctaaccaaagggttggattttagaaatgta
aagcttgttggtgttatgaatgccgataatatgctgaacttccctgattttagagcgcac
gagcgaagttttcagttaattcttcaagtggcaggtagggcaggacggacagatcagcgt
ggaaaagtattgattcagagttataatccgcatcataatatattacagcaagtatcgact
aatgattacttgtcgatgtataacgagcaaatggatgaacgttataattttaaatatcca
cctatatataagcagataaaaattactttaaaacacaaagattatttaaatgtagagaat
gcttctatctggtatgcgaaatcgttgcgaaatgcctttggtgattatgtgttgggacca
gaatcaccgcctgttgcaagaattcgaaatcagtttcacaaaaatatattggttaaaatc
cctaagaaacagtcgctggctaaaacaaaagaagctattactaaaattaataacagcttc
ttgagtataaaagattttcgttcagttaaggtggttttaaatgttgataacttttaa
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