KEGG   Aestuariibaculum sp. YM273: RBH94_01560
Entry
RBH94_01560       CDS       T09314                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aest  Aestuariibaculum sp. YM273
Pathway
aest03030  DNA replication
aest03430  Mismatch repair
aest03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aest00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RBH94_01560
   03430 Mismatch repair
    RBH94_01560
   03440 Homologous recombination
    RBH94_01560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aest03032]
    RBH94_01560
   03400 DNA repair and recombination proteins [BR:aest03400]
    RBH94_01560
Enzymes [BR:aest01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RBH94_01560
DNA replication proteins [BR:aest03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RBH94_01560
DNA repair and recombination proteins [BR:aest03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RBH94_01560
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: WMI65861
LinkDB
Position
complement(387426..388202)
AA seq 258 aa
MNLNLNKPICFFDLETTGVNITTDRIVEIAILKVHPNGKEESKRWLVNPTIPIPKEVTAI
HGISDEDVADKPTFKEIAKEVYNLIKDSDLGGFNSNRFDIPLLAEEMLRAEVDFDMKNRL
AVDVQTIFHKMEQRTLSAAYKFYCDKNLEDAHTAEADTLATYEVLKAQIAKYDDLENDTK
FLAEFSSRKQFADFAGFIAYNKKGEECFSFGKHKGKLVTEILENEPGYFGWLLNADFPLY
TKKVLTSIKLRSLNNKLG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaatttaaatttaaataagcccatttgtttttttgatttagaaacaacaggggtaaac
attacaaccgacagaattgtagaaatcgccatattaaaagtacatcctaatggaaaggaa
gagagcaaacgctggttggtaaatccaaccattcctatcccgaaagaagtaacggccatt
cacggtatttcagatgaagatgtcgcggacaaaccaacctttaaggaaatagcaaaagaa
gtttataatcttattaaggattccgatttaggaggattcaattctaaccgtttcgatatt
ccattgttagccgaagagatgttgcgtgctgaggtcgatttcgatatgaaaaaccgcttg
gcggtcgatgtgcaaactattttccataaaatggaacaacggactctaagtgcagcttat
aaattctattgtgataaaaatctggaagatgcgcatacagcagaagccgatactttggcg
acttatgaagtgctgaaagcacaaattgccaaatacgacgatttagaaaacgacacgaag
tttttggcggaattcagttcaagaaagcagtttgctgattttgctggatttattgcctat
aacaagaaaggtgaagagtgtttttctttcggcaaacataaggggaaattggtgaccgaa
attttagaaaatgaaccaggatatttcggctggttgcttaatgccgattttccactttat
accaaaaaagtgttgacttctatcaagcttagaagtttaaataataaactggggtaa

DBGET integrated database retrieval system