Aestuariibaculum sp. YM273: RBH94_02605
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Entry
RBH94_02605 CDS
T09314
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBH94_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aest03021
]
RBH94_02605
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_02605
Enzymes [BR:
aest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBH94_02605
Transcription machinery [BR:
aest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBH94_02605
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBH94_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
WMI66059
LinkDB
All DBs
Position
complement(603082..604074)
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
DVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIEDIDNESVSISISGQEQITAGDFQKFIS
GFQVLNTELVICNLDPKVNFNMEITIEKGRGYVPAEENKKAAAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSITPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVSVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcagaagcccgacaaagtaatcatgattgattcaacagatttt
gaagggaaattcgaatttcgtcctttagaacctggatacggtttaacagttggtaacgct
ttaagaagagtgcttctttcttcattagaaggttttgcaattacttctgtaagaatcgaa
gatgtagatcatgagttttcaacgattgctggtgtagtagaagatgttacagaaatcatc
ttaaacttaaagcaagtacgttttaaaagacaaattgaagatatcgacaacgagtctgta
tcaatctcaatttcaggtcaagagcaaatcactgctggagatttccaaaagtttatctca
ggattccaagtgttaaatacagaattagtaatctgtaacttagatccgaaagttaacttt
aacatggaaatcacaattgaaaaaggtagaggatatgtgcctgcagaggaaaataaaaaa
gctgctgcaccaataggaacaatctttacagattcaatttacacaccaataaaaaacgtt
aagtatagtattgagaactaccgtgtagagcaaaaaactgactacgaaaagttagtattt
gaaatcatcacagacggttctatcactcctcaagatgcattaacagaggctgctaaaacg
ttaattcaccacttcatgttattctcagatgagcgtattacattagaagctgatgaaatt
gcacaaactgaaacatatgatgaagaatcattacatatgagacagttacttaaaactaag
ttaatcgatatggatttatcggtacgtgcacttaactgtttaaaagctgcagaagttgat
actttaggagacttagtatcatttaacaaaaacgatttaatgaaattcagaaacttcggt
aagaagtctttaactgagcttgaagagcttgtaagtgttaaaggtttaaacttcggaatg
gatttaagcaaatacaaattagataaagattaa
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