Aestuariibaculum sp. YM273: RBH94_04975
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Entry
RBH94_04975 CDS
T09314
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBH94_04975 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_04975 (recO)
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RBH94_04975 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RBH94_04975 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WMI66515
LinkDB
All DBs
Position
complement(1185537..1186256)
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AA seq
239 aa
AA seq
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MLVTTNAIVLSKLKYKDNDLIVTCYTQELGVVGFLLKGVLKSKKSSNKAAYFQLLSQLQL
IINYNSNRSLQLVKESKPINVYSSLHTNILKSSIVMFLAEVMYSSLREEEQNETLYRYLE
AALLWLDEQPDFSNFHLLFLLNLTKYLGFYPDTSSIDFPYFNLVDGMFDLKEYGKHSVSG
ESLRLLKELLGMSFDDLSSVKINGKHRQSFLNMLLQYYELHLESFRKPKSLEILNQVFS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaccacaaatgctattgttctttctaaattaaaatataaggataacgatctc
atcgttacctgttatactcaagaattaggcgttgttggttttttgctgaaaggggtttta
aaaagtaaaaaatcgagtaataaggcagcgtactttcagttgttatctcaattacaatta
attataaattataatagtaatcgctcattacaacttgttaaagaatctaaacctattaat
gtctattctagtttacatactaatattttaaagagttcaattgtaatgtttttggcggaa
gtaatgtattcgtcattacgagaggaagaacaaaatgaaaccctttatcgttacttggaa
gctgctttattatggttagatgaacaacctgatttttcgaattttcatttattgttcctg
ctaaatctaacaaaatatctcggtttttaccctgatacatctagtatcgattttccgtat
ttcaatttagttgatggaatgttcgatttaaaagaatatggcaagcattctgtatcgggt
gaaagtttaaggttgctaaaagagcttttagggatgtcgttcgacgatttgtcatctgta
aaaattaatggaaaacaccggcagtccttcttaaatatgctattacagtattacgaattg
catttagagagttttagaaaaccaaagtctcttgaaatattaaatcaggtctttagttaa
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