Aestuariibaculum sp. YM273: RBH94_05620
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Entry
RBH94_05620 CDS
T09314
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest00521
Streptomycin biosynthesis
aest00523
Polyketide sugar unit biosynthesis
aest00525
Acarbose and validamycin biosynthesis
aest00541
Biosynthesis of various nucleotide sugars
aest01100
Metabolic pathways
aest01110
Biosynthesis of secondary metabolites
aest01250
Biosynthesis of nucleotide sugars
Module
aest_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RBH94_05620 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RBH94_05620 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RBH94_05620 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RBH94_05620 (rfbB)
00525 Acarbose and validamycin biosynthesis
RBH94_05620 (rfbB)
Enzymes [BR:
aest01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RBH94_05620 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WMI66640
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All DBs
Position
complement(1317243..1318250)
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AA seq
335 aa
AA seq
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MTILITGGAGFIGSNFISYFLKEYPGVKIVNLDKLTYAGDLSNLTDIEQSDRYTFVKGDI
CDRSFIEQLFKKFDFKGVIHFAAESHVDNSIMNPDDFMQTNVLGTYNLLDVAKNHWMQAP
NVVKKNFEEARFHHISTDEVYGSLGETGLFSESTPYAPNSPYSASKASSDFIVRSYFHTY
GMNVITTNCSNNYGPRQHDEKLIPTIIRKAINGEKIPIYGDGKNVRDWLYVDDHCKGIDL
VFQKGKAGETYNIGGNNERNNLDIADTICEILDEICPKDTSCKSQISFVKDRPGHDFRYA
IDTSKIESELGWKANENFESGIRKTIAWYLKKYKE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgactattttaattacaggaggagctggttttatagggagtaattttatttcttacttt
ctcaaagaatatcctggagttaaaatagttaatttagataaactgacttatgcaggagac
ctttctaatttaacagatattgaacaatcagataggtatacttttgtaaagggagatatt
tgtgatagaagttttattgaacagctttttaaaaaatttgattttaaaggcgttattcat
ttcgcagcggaatcgcacgtagataattctattatgaaccctgatgattttatgcaaacc
aatgttttgggaacatataatttgttagatgttgctaaaaatcattggatgcaggcgcct
aatgtggtgaaaaaaaactttgaagaagcaaggtttcatcatatttcaacagatgaagtt
tatggatctttaggagaaacaggtttgttttcagaaagtaccccgtatgcaccaaacagc
ccatatagtgcatcaaaagcatcatcagattttattgtaagaagctattttcatacttat
ggaatgaatgttataacgacaaattgttctaataattatgggcccagacaacatgacgaa
aagttaattccaaccattattagaaaagctataaacggagaaaaaatcccgatttatggt
gatggtaaaaatgttcgtgattggttgtatgtcgacgatcattgtaaggggatagacttg
gtttttcaaaaaggtaaagccggagaaacatacaatataggaggaaacaacgaacgaaat
aatttagatatagctgatactatttgcgaaatattagatgaaatatgtcctaaggatact
tcatgtaaatcgcaaatttcttttgttaaagatagacctggacatgattttagatatgcg
attgatacctctaaaattgaatctgaattgggatggaaagctaatgaaaatttcgaatca
ggaattagaaaaaccatagcttggtatttaaagaaatataaagaataa
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