Aestuariibaculum sp. YM273: RBH94_05655
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Entry
RBH94_05655 CDS
T09314
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
aest
Aestuariibaculum sp. YM273
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
RBH94_05655
Enzymes [BR:
aest01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RBH94_05655
Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RBH94_05655
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GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
WMI66647
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Position
complement(1324806..1326368)
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AA seq
520 aa
AA seq
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MAFRIFIVVCFVSFTSAFSQTNGVEVEEKTDVSQNNVVLKDSLVDGKKPKVTQVLFQNDS
LLIQKFEDNFLAAGVDEKWLEELYSNSLYDTVYNSVAQMNFEEVEYPELPTDTLKSRLAL
LNARTPFNVEYNPSLESVIKGYLKNRRELLQRLINLSAFYFPMFERELDNYNLPLEIKYL
AVVESALKPRAKSRVGATGLWQFMFSTGKMYGLDVSSYVDERSDPIKSTEAAAKYLSKLY
EIFGDWDLALAAYNSGPGNVTKAIRRSGGYQNYWNIRHNLPRETAGYLPAFLANMYIFEY
AEEHGFTRPRPEVAYFETDTIRVKQMITLDQVAEVTGVAIEELQFLNPSYKLDIIPFIKD
ENYTLRLPRTVIGDFVTNEEQIYAFAKAEFDKREKPLPQFFDADAKTIYRVRSGDFLGKI
ARKYGVRVSQIKQWNGLRSNDLRIGQRLTIYPRNPNMAVANNATTKVVAGNATTYVVKSG
DTLWGISQKFPGVSVQNIKDWNGIRGNTLKPGMKLKISKG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcgcatttttatagttgtatgttttgtgtcgtttacgagtgctttctcgcaa
acaaatggtgttgaggtagaagaaaagactgatgtttctcaaaataatgtcgttttaaag
gattctttagtggatggaaaaaagcctaaagtaacccaagttctatttcaaaacgactca
cttctaattcaaaagtttgaagataattttttagcggcaggtgtcgatgaaaaatggtta
gaagaattatatagtaattcgctttacgatacggtttacaattcggttgctcaaatgaat
tttgaggaggtcgaatatcctgaattacctaccgatactcttaagtctaggttagcctta
ttaaatgctagaacaccttttaatgtagaatacaatccaagtttggagagtgttattaaa
gggtatttaaaaaatcgtagagagttattacaacgcttaattaatttaagcgccttttac
tttccaatgttcgagcgagagttggataactacaatttgccattagaaataaaatactta
gcagtcgttgaatcagcgttaaaacctagggctaaatctagagtaggagcgactggttta
tggcagtttatgtttagtacaggtaaaatgtatggtttggatgtaagtagttatgttgat
gaacgtagcgacccaataaagtctactgaggcagctgcaaaatatttgtctaaactttat
gaaatttttggtgactgggatttagctttggcggcatataattctggccctggtaacgta
acaaaggcgattagaagatctggaggctatcagaattattggaatatcagacataattta
ccacgtgaaacagcgggatatcttccggcatttttagccaatatgtatatttttgaatac
gccgaagaacatgggtttaccaggcccagaccggaagtggcgtattttgaaacggatact
attcgtgtaaagcaaatgattactttagatcaggttgccgaggtaacaggtgtggctatt
gaggagcttcaatttttaaatccatcttataaattagatattattccgtttataaaagat
gaaaattacacgttgcgtttgccaagaacggtaataggtgacttcgttaccaacgaagaa
cagatttatgcgtttgctaaagccgaatttgataaacgagaaaagcctctacctcagttt
tttgatgccgatgctaaaaccatttacagagttagatcgggtgatttcttaggcaaaatt
gccagaaaatatggtgttcgagtgagtcagattaaacaatggaacggattgcgtagtaat
gatttaagaataggtcaacgattaacgatataccctagaaaccctaatatggctgttgct
aataatgctacaacaaaagtggtggctggtaacgcaacgacttatgtcgttaaaagtggt
gatacactttggggtatttctcaaaaatttcctggagtttctgttcaaaatattaaagat
tggaacggtattcgcggtaatactttaaaaccaggaatgaaacttaaaatatctaaagga
taa
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