Aestuariibaculum sp. YM273: RBH94_07195
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Entry
RBH94_07195 CDS
T09314
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03030
DNA replication
aest03410
Base excision repair
aest03420
Nucleotide excision repair
aest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH94_07195 (polA)
03410 Base excision repair
RBH94_07195 (polA)
03420 Nucleotide excision repair
RBH94_07195 (polA)
03440 Homologous recombination
RBH94_07195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aest03032
]
RBH94_07195 (polA)
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_07195 (polA)
Enzymes [BR:
aest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH94_07195 (polA)
DNA replication proteins [BR:
aest03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBH94_07195 (polA)
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBH94_07195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBH94_07195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WMI66938
LinkDB
All DBs
Position
complement(1674863..1677715)
Genome browser
AA seq
950 aa
AA seq
DB search
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGIDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSTDRVEMFEAYKANRDETPEAIKVAVPYIQEILKAMHIPIMVKEGYEADDVIGT
LSKQAEKQGYQTFMVTPDKDFAQLVSENIFMYRPKSFGGGYETWGIEEVKKKFEVTDPLQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFIAAYGSMEGLLENTHELKGKMKEKVEANKEL
GLLSKKLATIMLDVPVEFDEHDFEMSAPDTEKVTAIFNDLEFRQLLTNFLKTFSATTETT
TPQATATTETTTKTTETKKEPASAGAGQFSLFGGGDEDTETTIEYTRKTAETTSHFYQSV
ASGMATKLFIKNLMNQTSVCFDTETTDLNPLAAELVGIAFSWETGKGFYLPFPEDQNEAQ
ELIEELRPFFESETIEKIGQNLKYDIKVLAKYNITVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYTPISIETLIGKKGKNQLSMRQVALDKQTEYAVEDADITLQLKEHFEKELGEA
NTQKLFDDIEIPLLRVLATMEIEGINLDKDFLNSLAEQLNNDIKTLESKIYEIAGEEFNI
ASPKQLGDILFDKLKLVDKPKKTKTGQYATSEDILSYLAKDHDIIQYILDFRGLSKLKST
YVDALPLQVDANDHRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRNED
YTLLAADYSQIELRIIAALSEEETMINAFKHGEDIHASTASKVFNVPIEEVTREQRSNAK
TVNFGIIYGVSAFGLSNQTNLSRSEAKELIDTYYETYPKLKNYISQQVDFARDHGYVQTV
LGRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLETGDFKTKMLL
QVHDELVFDVFKPELDTIKTLVKTEMENAYQLAVPLDVDLGTGDNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaaaaacgtctatttttagttgatgcctacgctttaattttccgtgggtat
tacgcatttataaaaaaccccagaattaacagcaaaggtatcgacacctcagccattatg
ggatttatgaattcacttttagatgttattaaacgtgaaagaccagaccatttagccgtt
tgtttcgataaaggcggaagtaccgatcgtgtggaaatgttcgaggcttataaagcgaat
cgcgatgaaactccggaagctattaaagtggctgtaccctatattcaggaaattcttaaa
gccatgcatattcctattatggtaaaagaaggttatgaagctgatgatgtaataggaacc
ctttctaaacaagccgaaaaacaaggctaccaaacctttatggtaaccccagataaagac
tttgctcagttggtttctgaaaatatttttatgtaccgcccaaaatcgtttggtggcggt
tatgaaacctggggcattgaagaagttaaaaagaaatttgaagtgacagacccactacag
gtgattgactacttaggtatgatgggagacgccagcgacaacattcccggattaccgggc
gtaggcgacaaaaccgccaaaaagtttatcgcagcttacggaagtatggagggcttactg
gaaaacactcacgaactgaaaggaaaaatgaaagagaaagttgaagccaataaagaactc
ggcttactttctaaaaaactagccactattatgctggatgttcctgtagaatttgatgag
catgattttgaaatgtctgcacctgacacagaaaaagtaacagctattttcaacgattta
gaattcagacagcttttaactaatttcttaaaaaccttttcggcaactacagaaaccaca
actcctcaagcaactgctactactgaaaccactacaaaaacaacagaaaccaaaaaagaa
ccggcatcagctggggctggacagttttctctttttggaggtggtgatgaagacactgaa
acaacaatagaatacaccagaaaaacagctgaaaccacatcgcatttttaccaaagtgtg
gcttcagggatggcgaccaagctattcattaaaaacttaatgaatcaaacctcagtgtgt
tttgatactgaaactacagacctaaatcctttagctgccgaattggttggtattgcattt
tcatgggaaaccggcaaagggttttatctgccattcccagaagaccaaaacgaagctcag
gaacttattgaagaattacgtccgttttttgaaagcgaaaccatcgaaaaaattggtcag
aatttaaaatacgatattaaagttttagccaaatacaacatcacggttaaagggaaatta
ttcgacaccatgctggcccattatctgattaatccggatatgcgtcataacatggatgtt
ctggctgaaacctatttaaactatacgccaatttccattgaaaccctaattggtaagaaa
ggaaaaaatcaactatcaatgcgtcaggttgctttagacaagcaaaccgaatatgccgtt
gaagacgctgatatcacccttcagcttaaagaacattttgaaaaagaattaggtgaagcc
aatacacaaaaactatttgatgatattgaaattccattactacgtgttttggcaactatg
gaaattgaaggtattaacttagataaagacttcttaaacagtctggctgaacagttaaac
aatgatattaaaacactggaaagtaaaatttacgaaattgccggtgaagaattcaacatc
gcttcaccaaagcagcttggtgatattttatttgacaaactaaaactggttgataaaccg
aaaaagaccaaaactggacaatacgcgacatctgaagacatcttaagctacctggctaaa
gaccacgacatcattcaatatattttagatttcagaggactttcgaaactaaaaagtaca
tacgttgatgctttgccgcttcaggttgacgctaacgaccatcgtgttcacaccgattac
atgcaaaccgttgctgcaaccggacgtttaagcagcaacaacccgaacttacaaaacatc
cccattcgtacagagcgcggacgccaggtgcgtaaggcctttgtccctcgtaatgaagat
tacacgctactcgctgccgattacagccagattgaacttcgaattattgccgctttaagt
gaagaagaaaccatgattaacgcctttaaacatggtgaagacattcacgcctcgaccgct
tcaaaagtgtttaatgtaccgattgaagaagtcactcgagaacagcgtagtaatgcaaaa
accgtaaacttcggaatcatctacggggtttctgctttcggattaagcaaccaaaccaat
ttatcgcgtagcgaagctaaagagttaatcgatacgtattatgaaacgtatccgaagtta
aaaaactacatcagtcagcaagtcgattttgctcgcgaccatggttatgtacaaaccgtc
ttaggacgtcgtcgttacctaaaggatattaactcacgtaacgctgtggttcgtggtgct
gccgaacgtaatgccgtaaacgcgccaattcaaggtagtgctgccgatattattaaaatt
gctatgattaatattcataagaaattagaaaccggcgattttaaaactaaaatgctactt
caggttcatgatgaattagtattcgatgtttttaaacctgaactagacactattaaaacc
ctggtaaaaaccgaaatggaaaacgcttaccaattagccgtgccgctagatgtcgattta
ggtactggtgataactggctggaggcgcattaa
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