Aestuariibaculum sp. YM273: RBH94_07560
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Entry
RBH94_07560 CDS
T09314
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBH94_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aest03021
]
RBH94_07560
Transcription machinery [BR:
aest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBH94_07560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_11
PgaD
Motif
Other DBs
NCBI-ProteinID:
WMI67002
LinkDB
All DBs
Position
complement(1760619..1761482)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRESKSLDKYLQDISKIPLITADEEVELAQRIRQGDQVALDRLTTANLR
FVVSVAKQYQNQGLTLPDLINEGNAGLVKAAKRFDETRGFKFISYAVWWIRQAILQALAE
QSRIVRLPLNKIGSINRINKAYSFLEQTHERAPSAEEIAQELDLTVSDVKQSMKNSGRHL
SMDAPLKEGETSNLYDVVSTGDSPNPDRELINESLSTEIERALDTLSQKESDIIRLNFGL
SNQPPMSLDEIGKTFDLTRERVRQIREKGIRRLKHTSKSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacttaaaatcacgaaacaagtaaccaacagagagtctaaatcccttgataag
tacttgcaagatattagtaaaattccactaatcacagctgacgaagaagtggaactggca
cagcgtatcagacaaggggatcaagtggctttagataggttaacaacagccaacttacgt
tttgttgtttcggtagctaaacaatatcaaaatcaaggacttactctacccgatttaata
aacgaagggaatgccggattggtaaaagctgccaaacgttttgatgaaactcgaggattt
aagttcatttcgtatgccgtttggtggattcgtcaagcaattcttcaagctttagccgaa
caatctcgaatagttagattacctttgaacaaaattggttcaatcaatcgaattaataag
gcttattcgtttttagaacaaacccacgagcgcgctccgagtgctgaagaaattgctcag
gaattagatttaacggttagcgacgttaaacaatccatgaaaaattccggacgccaccta
tccatggacgcaccattaaaagaaggtgaaacttctaatttatatgatgtggtttcaact
ggtgattcgccaaacccggatagagaattaataaacgaatcgttaagtactgaaatagaa
agagccttagataccttatcgcaaaaagaaagcgacattattcgtttaaactttgggtta
agtaatcaaccaccaatgagtttagatgaaattggaaaaacattcgatttaaccagagag
cgtgtgcgccaaataagagaaaaaggtattagacgattaaaacatacatcgaaaagtaaa
attttaaaaacttatttaggatag
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