Aestuariibaculum sp. YM273: RBH94_08215
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Entry
RBH94_08215 CDS
T09314
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest00550
Peptidoglycan biosynthesis
aest01100
Metabolic pathways
aest01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBH94_08215 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBH94_08215 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
RBH94_08215 (mrdA)
Enzymes [BR:
aest01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBH94_08215 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBH94_08215 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WMI64054
UniProt:
A0AA51GKT2
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All DBs
Position
complement(1921069..1923012)
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AA seq
647 aa
AA seq
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MRQFLLYIVIVLAGLLFISRLFYLQIYNPNSNNLFEDNAIRKVYDYPKRGFVFDRNGELL
VSNQPSYDVMVIPREVKPLDTLEFCSLLKIDKERFKEKYKEAYNYSPRLPYVFIPQLSKA
DYAVLQEKMRKFEGFYIQKRSLRHYQTSIGANVLGSISEVRNRDMENDPYYKSGDLIGRE
GVEASYEEILRGVKGIKFIQKDRFNRNIGPYKDGIYDTIPVQGKDITITIDAELQAYGEL
LMRNKRGGIVALEPSSGEILAMIAAPSFDPNLLVGRERSKNFTKLFRDSIAKPLFNRSLQ
GVYEPGSPFKLMNALIALQEGVMTPNEIVTCNGGYHYGGRVMGCHCAYGTRNNMVGGIMH
SCNAYFATAYRKILDKNGNASEGIDKWSSHAKSFGLGNFLGYDLQIGQKGRIPDRDYYKY
VYPNTFYSTYTISNAIGQGEVATTPIQLANMIAAIANRGYFYTPHIIKEIEGQDIPEKYT
TPKHTTIDKENFEPVIEGMLQVYKQGTASALQVPDIEICGKTGTVENFTTIDSTRTQLTD
HSIFVAFAPKDNPKIALAVFVENGYWGSRFAGRVASLLIEKHLKGEITRTDLEDWLLRHT
LEHEYEKPYSGEPFGINRNTTLEQVSPEEYKELKEELAKLNNQNING
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatttttgctttacattgttatagttctagcaggattattgtttatttctagg
ctcttttatcttcaaatctacaatccaaatagtaacaatttatttgaagacaatgccatt
agaaaagtttacgattatccgaagcgcggttttgttttcgaccgtaatggcgaactatta
gtatcaaaccagccatcctacgatgtgatggtgattcctcgtgaagtaaaaccactagat
accttagagttttgttcgcttttaaaaatagacaaagaacgctttaaagaaaaatacaaa
gaagcctataattattccccgaggttaccatacgtattcattcctcaattatcaaaggcc
gattatgcggttttacaggaaaagatgcgaaagtttgaagggttttatatccaaaaacgt
tcgttaagacattatcagacctctattggagctaatgttttaggtagcattagtgaagta
aggaatcgtgatatggaaaatgacccatattataaatccggagatttaattggtagagaa
ggtgtcgaagcctcttatgaagaaattctgcgtggtgtaaaaggcataaaatttattcag
aaagaccgatttaatagaaacatcggcccttacaaagatggcatctacgacaccattcct
gtacaaggcaaagacattaccattaccattgatgccgaattacaagcctatggcgaatta
ttaatgcgtaataaacgcggtggtatcgttgcattagaaccatcgtccggagagattttg
gctatgattgctgctccttccttcgatccgaatttactggttgggcgagaacgttctaaa
aatttcaccaaattatttagagactccattgccaagcccctttttaatcgaagcttgcaa
ggggtttacgaacctggttctccttttaaattaatgaatgccttaatagcacttcaggaa
ggcgtaatgaccccaaatgaaattgtaacctgtaatggaggctatcattatggtgggcgc
gttatgggatgtcactgtgcttatggcaccagaaataacatggttggcggcattatgcac
tcttgcaatgcttactttgcaacggcttatagaaaaatattagataaaaacggaaatgcc
tccgagggtattgataaatggagttcccatgccaaaagttttggtttaggtaactttttg
gggtacgacttacaaattggtcaaaaaggtagaattccggatcgtgattactacaaatac
gtatacccaaataccttttattctacttataccatatcgaatgctattggtcagggagag
gttgccacaacccctattcaattagcaaatatgatagcagctatagcgaatagaggttat
ttttatacaccacatatcattaaagaaattgaaggtcaagacattccggaaaagtataca
acacctaaacataccacaattgacaaggaaaattttgaaccggttatagaaggtatgcta
caagtttacaaacaaggtacagcctctgctttacaagttccggatattgagatttgtgga
aaaacaggtacggtagaaaatttcacaacaatagatagcacaagaacacaacttaccgac
cattccattttcgtggcctttgcacctaaagacaatcctaaaattgctttggccgttttt
gttgaaaatgggtactggggaagtcgttttgcaggacgagtagccagtttacttatagaa
aaacatctaaaaggtgaaattacccgtaccgatttagaagactggttgttacgacatacg
ttagaacacgaatatgaaaaaccttattcaggagaaccttttggcattaaccgaaatacc
acactagagcaagtatctccagaagaatacaaagaacttaaagaagaattagccaaactt
aacaaccaaaacattaatggttag
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