Aestuariibaculum sp. YM273: RBH94_08260
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Entry
RBH94_08260 CDS
T09314
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBH94_08260 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aest03019
]
RBH94_08260 (groL)
03110 Chaperones and folding catalysts [BR:
aest03110
]
RBH94_08260 (groL)
03029 Mitochondrial biogenesis [BR:
aest03029
]
RBH94_08260 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aest04147
]
RBH94_08260 (groL)
Enzymes [BR:
aest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RBH94_08260 (groL)
Messenger RNA biogenesis [BR:
aest03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RBH94_08260 (groL)
Chaperones and folding catalysts [BR:
aest03110
]
Heat shock proteins
HSP60 / Chaperonin
RBH94_08260 (groL)
Mitochondrial biogenesis [BR:
aest03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RBH94_08260 (groL)
Exosome [BR:
aest04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RBH94_08260 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RBH94_08260 (groL)
Exosomal proteins of breast cancer cells
RBH94_08260 (groL)
Exosomal proteins of colorectal cancer cells
RBH94_08260 (groL)
Exosomal proteins of bladder cancer cells
RBH94_08260 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
WMI64063
LinkDB
All DBs
Position
complement(1930055..1931683)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGAPHVTKDGVSVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQSIVKEGLKNVAAGANPMDLKRGID
KAVEAITKDLEAQSQEVGNSSEKIKQVAAISANNDDTIGELISQAFSKVGKEGVITVEEA
KGMDTYVDVVEGMQFDRGYLSPYFVTDTDKMIADLENPYILLFDKKISNLQEILPILEPV
AQSGRPLVIVAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADLSMLGTAETVTIDKDNTTIVNGSGDADNIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLESLTTENLDEVTGIQIVARAIEEPLRTIVENAGGEGSVVVNKVLEGEKDFGYDA
KSEAYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALVDIKEDAPAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgcgacggtttaaaacgtggcgttgac
gcattagcaaacgcagtaaaagtaactttaggtcctaaaggacgtaacgtcatcattgga
aaaagttttggcgcacctcacgttactaaagatggtgtttctgtagctaaagaaattgaa
ttagaagatgctcttgaaaacatgggcgctcaaatggtaaaagaagtagcttcaaaaact
aacgatctagcgggtgacggtacaactactgctactgttttagcacaatctatcgtaaaa
gaaggtttaaaaaacgttgctgccggtgctaacccaatggatttaaaacgtggtattgat
aaagctgttgaagccattactaaagaccttgaagcacagtctcaagaggtaggtaactct
tcagaaaaaatcaaacaagttgctgcaatttcagcaaataacgacgacactattggtgaa
ttaatttcacaagctttctctaaagtaggtaaagaaggtgtgattactgttgaagaagct
aaaggtatggatacttatgttgacgttgtagaaggtatgcaattcgacagaggatactta
tcgccttacttcgtaacagacaccgataaaatgattgccgatttagaaaatccatacatt
ttattattcgacaaaaagatttctaacttacaggaaatccttccaatattagaaccagtt
gcacaatctggtcgtccattagttatcgtcgctgaagatgtagacggacaagctttagct
actttagtagtaaacaaattacgtggtggtttaaaaatcgctgctgttaaagcgcctgga
tttggagacagacgtaaagctatgttagaagacattgctatcctaactggtggtacagtg
atttctgaagaaagaggatttactttagaaaatgcagatttaagcatgttaggtactgct
gaaaccgtaaccatcgacaaagacaacactacaattgttaatggttctggcgatgctgat
aacattaaagcacgtgtaaaccaaattaaagcacaaattgaaacaacaactagcgattac
gataaagaaaaattacaggagcgtttagctaaattagctggtggtgttgctgtgctttac
gttggtgctgctagtgaagttgaaatgaaagaaaagaaagaccgtgttgatgatgcatta
cacgctacaagagctgctgtagaagaaggtatcgttgccggtggtggtgttgctttagta
agagcaaaagctgttttagaatcattaactactgaaaacttagacgaagttacaggtatc
caaatcgttgctcgtgcaatcgaggagccattacgaactattgtcgaaaatgcaggtggt
gaaggtagcgtagttgtaaacaaggtattagaaggtgaaaaagactttggttacgatgca
aaatctgaagcttatgtagatatgcttaaggctggtattatcgatcctaagaaagtaacg
cgtgtagcattagaaaatgcagcatcagtttctggaatgattttaacaacagaatgtgcc
ttagttgacattaaagaagatgctccggctatgcccccaatgggtggtggtatgccaggc
atgatgtag
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