Aestuariibaculum sp. YM273: RBH94_09930
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Entry
RBH94_09930 CDS
T09314
Symbol
gatB_aspS
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBH94_09930 (gatB_aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aest01007
]
RBH94_09930 (gatB_aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aest03016
]
RBH94_09930 (gatB_aspS)
03029 Mitochondrial biogenesis [BR:
aest03029
]
RBH94_09930 (gatB_aspS)
Enzymes [BR:
aest01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RBH94_09930 (gatB_aspS)
Amino acid related enzymes [BR:
aest01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RBH94_09930 (gatB_aspS)
Transfer RNA biogenesis [BR:
aest03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RBH94_09930 (gatB_aspS)
Prokaryotic type
Other AARSs
RBH94_09930 (gatB_aspS)
Mitochondrial biogenesis [BR:
aest03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RBH94_09930 (gatB_aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2d
tRNA-synt_2b
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WMI64380
UniProt:
A0AA51BTJ3
LinkDB
All DBs
Position
complement(2323091..2326423)
Genome browser
AA seq
1110 aa
AA seq
DB search
MELEQLDALLKAHELELVIGLETHVRLNTKTKLFCSCPNQEIETPNQNICSVCTGQMGVL
PAVNKEAVKKAIYFGKAVKSTFDNDVISWDRKHYEYPDNPKNIQITQFHNPIIPDGQVSC
FRNDGSQFTVNLTQVHIEEDAAKLMHEKTVSLVDFNKAGVPLIEIVTEPCIRHIEDASTY
AQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKHSYALNPRTEIKNLNSFKFMVDALKE
EVEKQLNYYIEHKEFRPDQTTVLWDADLKQTKTMRKKEYEADYRFISEPDLPFVCIKDVV
ESIDVDVSSLPFAVESILIKGGVLPQDAKFFTADSLRSETFVAINDVIQDPSFVAKTLTN
NIKPEEYGDIHRVEHLIEIFQLFKSEKITSVLVQNAITEYLKDRHFDYNQYFDENTISED
KIQDAIAKVISENETIANDIKEGNQGKAGILVGKVIAIIGKGASGKVIREGILSALQANT
SANASSEATVKTKAEAQASSKKDQEEVLPEIPMVIKEEYRTHLITDINDDSITQEVTFAG
WVASVRDHGELIFIDLRDSSAEKFQVRLSRESFPNLDELVRLKPESVITVSGTIVQRKED
DYNAALRTGKIELEAKELDILNLSRTLPFEIKRATKTNENTRFQYKYLDHRNDDVRRTIV
NRHKVIKLLRDILDEQDFLEIETPILSAGTDEGAREFIVPSRKQAGSFYTLPQAPQQFKQ
MLMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEVAYASMQQIIDLNTKMFNEVVTKI
YGNKWKLYPFEVLTYKEAMDNYGCDRPDLRFGLKLQDITEIVKDTTFQVFSKPIEEGGIV
KCIKVTAEEQGKKRLSKGQIEKLTGIAQQHGLGGLAYIIVNEDDLQSPIIKFLGEDIAAG
IIEVTNAQVGDIVFFSAADYATANKALDAVRQELGSMLKLINPKELRPAWVVDFPMFEKT
DEGRWTFTHNPFSMPAVYDIEKHMNGKEEEIGSIIAQQYDLILNGYEIGGGSVRAHKPEI
LEATYKNMGYNKDEMMKSVGTMYKSFHYGAPPHGGIAWGVDRLMMILEKKNSIREVMAFP
KTGTSEDLLFGAPSMLSDKKVEEMNVKIMK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaacaattagacgcgcttttaaaagcccacgaattagaattggttatcgga
ctggaaactcacgtgcgattaaacacaaaaaccaaactgttttgttcttgtcctaaccaa
gaaattgaaacaccaaaccaaaatatatgctcggtttgtacgggtcaaatgggtgtttta
cctgccgttaataaagaagcggtaaaaaaggctatttattttggtaaggctgtaaaatcg
acatttgataacgatgtgatttcatgggatagaaaacactatgaatatccagacaacccg
aaaaacatacaaattacgcagtttcacaacccgataattcctgacggacaagtctcttgt
ttccgtaatgatgggtctcagtttactgtaaacttaactcaggtacatatcgaggaagat
gcagcgaaactgatgcacgaaaaaacagtttctttggtagatttcaacaaagctggtgtg
ccgcttatcgaaattgttacagagccttgtattcgacatattgaagatgcttcaacttat
gcgcaatacattcagcgtatagttcaaaatttaaaaatctctgaagctaacttagaaaaa
ggcgaatttaagtcggatgtctcagtgtcgcttcgtaaaaaacattcatatgcattaaat
ccgcgtaccgaaataaaaaacttaaactcatttaagtttatggtcgatgctttaaaagag
gaagttgaaaaacaactgaattattacattgaacataaagagttcagacccgatcaaaca
accgtgctttgggatgccgatttaaagcaaaccaaaaccatgcgtaaaaaggaatacgag
gccgattaccgttttatctcggaaccagacctgccttttgtttgtataaaagatgtggta
gaatcgattgatgttgatgtgagttcattgccttttgcggtagaatccattttaattaaa
ggcggcgttttacctcaggacgctaagttttttacagcagattctttacgttcggaaacc
tttgtggctattaacgatgttattcaggacccgtcgtttgttgcaaaaacattaaccaac
aacatcaaacctgaagaatacggagacattcaccgtgttgaacatttaatcgaaattttc
cagctatttaaatcggaaaaaatcacctctgttttagttcaaaatgcgattactgaatat
ttaaaagacagacattttgattacaaccaatattttgatgagaacaccatttctgaagac
aaaattcaggatgccattgctaaagtcatttcagaaaacgaaaccatagctaacgacatt
aaagaaggaaaccaaggtaaagctggtattttagttggaaaagtgattgcaattattggt
aaaggcgcttcaggtaaagtgattcgtgaaggcattttaagtgcacttcaagcaaacacc
tcagcgaacgcttcatcagaagcaacagtaaaaacaaaggctgaagctcaagcatcttct
aaaaaggaccaggaagaagttttacctgaaatccctatggtcattaaagaagaatatcgt
acccatttaattaccgatattaatgatgacagtattacccaggaagtcacttttgctgga
tgggtagccagcgtacgtgaccacggcgaattaattttcatcgacctaagagattcaagc
gcagagaaatttcaggtacgtttaagtcgcgagtccttccctaaccttgatgaactggtt
cgattaaaaccagagtcggtaatcacggtttcaggaaccattgttcagcgtaaagaagat
gattacaatgccgcgttacgcaccggaaaaatagaacttgaagctaaagaacttgatatt
ttaaatctttcaagaacactgccatttgaaataaaacgggcgactaaaacaaacgaaaac
actcgttttcaatataaatatttagatcacagaaatgacgatgtgcgtcgtactatcgtg
aaccgacataaagtaattaagctgcttcgtgacatcttagatgagcaagatttccttgaa
atagaaacacctattttaagtgccggaaccgacgaaggggctcgtgaatttattgttcct
tccagaaaacaagctggctcattttatacgctaccacaagcgccacagcagtttaaacaa
atgttaatggtgagtggttatgaaaaatatttccaaatagcacgttgttttagagatgaa
gactcgcgtggcgacagacaaccagagtttacgcagctagacattgaggtggcgtatgcc
agcatgcaacaaatcatcgatttaaacaccaaaatgtttaacgaggtggtgactaaaatc
tatggtaacaaatggaaactttacccgtttgaagtgttgacatacaaagaagcgatggac
aactacggttgcgaccgacctgacttacgttttggcttaaagcttcaagatattaccgaa
attgttaaagacaccacattccaagtgtttagtaaacctattgaagaaggtggaattgta
aaatgtatcaaggttaccgctgaggagcaaggtaaaaaacgcctatcgaaaggtcaaatt
gaaaaattaactggcattgctcagcaacacggtttaggtggtttagcttacatcatcgtg
aatgaagacgatttacaatcgccaattattaagttcttaggtgaagatatcgctgcagga
attattgaagtcacaaatgctcaagttggcgatattgtattcttctcggctgccgattat
gccacagctaacaaagctctagatgctgttcgtcaggaattaggaagtatgctgaaatta
atcaaccctaaggaattaagaccagcatgggtagttgatttcccaatgtttgaaaaaacc
gacgaaggtcgctggacctttacccacaacccgttctcgatgcctgccgtttacgacatt
gaaaaacacatgaatggcaaagaagaagaaatcggatcgataatcgcgcaacaatacgat
ttaattctgaatggttatgaaattggaggcggttctgtgcgtgcgcacaaaccagaaatt
ctggaagctacctataaaaacatgggctacaacaaagatgaaatgatgaagagtgttggc
actatgtacaagtccttccactacggagcgccgccacacggtggtattgcctggggtgta
gaccgattaatgatgattttagaaaagaaaaactctattcgagaagtcatggccttccct
aaaacaggaaccagcgaagatttactgtttggtgctccctccatgctttcagataaaaaa
gtagaagaaatgaatgtaaaaatcatgaaataa
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