Aestuariibaculum sp. YM273: RBH94_11520
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Entry
RBH94_11520 CDS
T09314
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03030
DNA replication
aest03430
Mismatch repair
aest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH94_11520 (holA)
03430 Mismatch repair
RBH94_11520 (holA)
03440 Homologous recombination
RBH94_11520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aest03032
]
RBH94_11520 (holA)
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_11520 (holA)
Enzymes [BR:
aest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH94_11520 (holA)
DNA replication proteins [BR:
aest03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBH94_11520 (holA)
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBH94_11520 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF896
Motif
Other DBs
NCBI-ProteinID:
WMI64687
LinkDB
All DBs
Position
2678461..2679465
Genome browser
AA seq
334 aa
AA seq
DB search
MDDVKQLVTDIKNGNLKPIYFLMGEEPYYIDRISDFIEENVLAEEERGFNQMVLYGRDIT
IDDIVSNAKRYPMMAEHQVVIVKEAQDLSRTIEKLADYAKNPQPSTVLVINYKYKTIDKR
KTLYKTLKTTGVIYESKKLYENQVADWIRRVLASQKYSIEPKAAQMLVEFLGTDLSKINN
ELEKLKIILPNGSQITPEHIEENIGISKDFNNFELRKAIGERDVMKAHRIVKYFADNPKD
NPMVVTVSLLFNFFSQLLHYHGLKDKSPRNVASALKINPYFVNEYVAAARNYPMRQVSMV
VATLRDFDVKSKGVGANAVPQGDLLKELLVKILA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacgtaaaacaattagtaactgatattaaaaacgggaacctgaaacctatttac
ttcttaatgggagaggagccttattatattgatagaatttcggactttatcgaggaaaat
gttttagctgaagaagaacgtggttttaatcaaatggtgctttatggtcgagatattact
attgatgatattgtaagtaatgctaagcgttacccgatgatggcagaacatcaggtggta
attgtaaaagaagctcaggatttatcacgtacaatagaaaagttagctgattatgctaaa
aatccgcagccgtctaccgttttagtaattaattataaatacaaaactattgataagcgt
aaaacgctttataaaacattgaaaactaccggggtgatttatgaaagtaaaaagctttat
gagaatcaggtagccgattggattcgacgcgtattagcttctcagaaatacagtattgaa
ccaaaggcagctcagatgttggtcgaatttttaggaacagatttgagcaagattaataac
gaacttgaaaaactgaaaattattctacctaatggaagtcagattacacccgagcatatt
gaggaaaatatagggataagtaaagacttcaataattttgagttgagaaaggctattggc
gaacgtgacgttatgaaggcgcatcgcattgtaaaatattttgccgataatcctaaggat
aatcctatggtggttacagtgtcgttgttgtttaacttcttttctcagttattacactac
cacggacttaaagataagtctccaagaaatgttgcttcagccttaaaaatcaatccgtat
tttgtaaatgagtatgttgcagcagcaagaaattaccctatgcgtcaggtaagtatggtt
gtggcaacgctaagagattttgatgtaaaaagtaaaggtgttggcgctaatgctgttcca
caaggtgatttactgaaagaattattagtgaaaatactagcttaa
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