Aestuariibaculum sp. YM273: RBH94_12280
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Entry
RBH94_12280 CDS
T09314
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aest
Aestuariibaculum sp. YM273
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_12280
Enzymes [BR:
aest01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RBH94_12280
DNA repair and recombination proteins [BR:
aest03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RBH94_12280
Prokaryotic type
RBH94_12280
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WMI64836
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Position
complement(2852083..2853390)
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AA seq
435 aa
AA seq
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MKKTINIFWFRRDLRLHDNHGLYKALSGKLPVLPIFIFDTEILDKLPNDDARVSFIFDTL
QDINSTLKEQHNKSLAIYYGKPEEVYKTICENYTLNTVFTNHDYEPYAMDRDSKIEAFLN
TKGIHFKTFKDQVIFERNEITKVDGSPYVVYTPYMKVWKSTFKTQKTEPYPSEDLLSNLI
ENNDLPNIDLNSMGFIRSSQKIEDYTVTPETIASYEDTRNFPAKDATSKLGPHLRFGTVS
VRNMVNKANQSKNEVFLQELIWREFFMQILWHFPHTVTESFKPKYDRIVWRNNEEEFKLW
CEGKTGYPLVDAGMRQLNQTGFMHNRVRMLVGSFLCKHLLIDWRWGEAYFAEKLHDYEMA
SNIGNWQWVAGSGVDAAPYFRIFNPTTQIEKFDKNLEYIKQWVPEFEELTYPNPIVDHKF
ARERCLKVYKEALNN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaatcaatatattctggtttcgtcgcgatttaagacttcatgataatcat
gggttatataaagcattatctggcaaactccccgttttacctatttttatttttgatact
gaaattctggataaacttccaaacgatgatgccagggtaagctttattttcgatacgctt
caggacataaattcaacactcaaagaacaacataacaaatctttagctatttattatggg
aaaccggaagaggtgtataaaaccatctgtgaaaattatactttaaacacggtatttacc
aatcatgattatgagccatatgctatggatcgtgactctaaaattgaggcttttttaaat
acaaaaggtattcattttaaaacgtttaaagatcaggttatttttgagcgtaacgagatt
acaaaagtcgatggttcgccttacgtagtgtatacaccctacatgaaagtttggaagtcc
acattcaaaactcaaaagacagaaccgtatccaagcgaagacctattaagtaatctaatt
gaaaataacgacctgccaaatatcgatttaaactcgatggggtttattcgttcctctcaa
aaaattgaagattacactgtaactccagaaaccattgcttcttatgaagatacaagaaat
tttcctgcaaaagacgcaacgtctaaattaggccctcacctgcgtttcggaactgtaagt
gtaagaaatatggtcaataaagctaaccagtctaaaaacgaagtgtttcttcaggaattg
atttggcgtgagtttttcatgcaaattttatggcatttcccgcatacagtaacagaaagt
ttcaaaccgaaatacgaccgtattgtttggagaaataacgaagaagaatttaagttatgg
tgtgaaggaaaaacaggttatccgttagttgatgccggcatgagacaactcaatcaaacc
ggatttatgcataaccgtgtaagaatgcttgttggcagctttttgtgtaaacatctatta
attgattggcgttggggagaagcctattttgccgaaaaactccacgattatgaaatggct
agcaatattgggaactggcaatgggttgctggaagtggtgttgatgccgctccctatttc
agaatatttaatcctaccacacaaatagaaaagttcgacaaaaatttagagtatattaaa
caatgggttcccgaatttgaggagctcacctaccctaaccctatagttgatcataaattt
gctcgcgaacgttgcttaaaagtttataaagaagctttaaacaattaa
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