Aestuariibaculum sp. YM273: RBH94_12325
Help
Entry
RBH94_12325 CDS
T09314
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
aest
Aestuariibaculum sp. YM273
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_12325
Enzymes [BR:
aest01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RBH94_12325
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RBH94_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WMI64843
LinkDB
All DBs
Position
complement(2858122..2859654)
Genome browser
AA seq
510 aa
AA seq
DB search
MKTLRLILGDQLNYKHSWYKTQQDNYVYCMFEMRQETDYVTHHIQKIIGFFAAMRDFSNV
LKSEGHHLEYFKLNDKRNTQNLIENLKIIIQEHNIEKFEYQLPGEYRLDQQLLIFTKDLK
IPTQAFSTEHFYTNRYELKNFFKNKKQFLMETFYRQMRKTHNILIIDNQPEGGKWNFDKS
NRNKWKDAHHIPPFKKFNNDVTDIVELLKNENIKSIGSFKSNTFEYPINRVQALEQLKYF
CENLLIHFGDYQDAMHTKQVNLFHSRLSFALNLKLISPKNVVDTVLNYWYKYGKDISISQ
VEGFIRQIIGWREYMRGMYWALMPEYSNLNALNNTHSLPGFYWTGNTKMNCLKHAITNSL
ENGYAHHIQRLMVTGNFALLAQIHPDAVDKWYLGIYVDAIEWVQLPNTRGMSQFADGGKI
ATKPYVSSASYINKMSNYCESCYYNKNEKLGDDACPFNSLYWNFLDDKRKALSNNHRMGM
MFSLLDKMDKTQLVKIKERAKTIMESPDNF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccttaagactcatacttggcgatcaattaaattataaacacagctggtacaaa
acacagcaagataattatgtgtattgcatgttcgagatgcgtcaggaaactgattatgtt
acacatcatattcaaaaaattattggcttttttgctgccatgcgagacttttcaaacgta
ttaaaatccgaaggacatcaccttgagtattttaaattaaacgataaaagaaacactcaa
aatcttatcgaaaatctgaagataattattcaggaacataacattgaaaaatttgaatac
cagctacccggcgaatacaggctagaccaacaattattgatctttacaaaagatttgaag
atacctacacaagcattttctaccgaacacttttacacaaatcgttacgaattaaaaaac
ttttttaagaacaaaaagcaattccttatggagacgttttaccggcaaatgcgtaaaacg
cataacattcttattattgataatcaacctgaaggtggtaaatggaatttcgacaaaagc
aatagaaacaaatggaaagacgcacaccatattcctccttttaaaaaattcaataatgat
gttacagacattgttgaactgctaaaaaatgaaaacataaaatccattggttcgtttaaa
tctaacacttttgaataccccattaaccgagtacaggctttagagcaactgaaatatttc
tgcgaaaacttattaattcatttcggtgattaccaggatgctatgcacacaaaacaagtg
aatttatttcactcgcgtttatcttttgccttgaatttaaaactcatttcacctaaaaat
gtggtcgatacggttttaaattattggtataaatacggtaaagacattagtatttctcaa
gtagaagggtttattagacaaattataggttggcgtgaatacatgaggggtatgtactgg
gcattaatgcctgaatatagcaatctaaacgctttaaataacacccattcacttcccggt
ttttactggacaggaaacacaaaaatgaactgtttaaagcatgccatcaccaatagtctg
gaaaacggttacgcacaccatattcaacgattaatggttaccggaaactttgctttgtta
gctcaaattcaccccgatgcagtcgacaaatggtatctaggaatttatgtcgatgccata
gaatgggtacaattacccaatacacgtggcatgagtcaatttgctgatgggggaaaaatt
gccacaaaaccatatgtttcaagtgccagttacattaacaaaatgagtaattattgcgaa
agctgttactacaataaaaatgaaaaattaggtgatgatgcctgcccgttcaatagtcta
tactggaactttttagatgataaacgcaaagctctgagcaataaccaccgcatgggcatg
atgtttagcctacttgataaaatggataaaactcaacttgtaaaaattaaggagcgtgct
aaaactataatggaatctcctgacaatttttaa
DBGET
integrated database retrieval system
