Aestuariibaculum sp. YM273: RBH94_15585
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Entry
RBH94_15585 CDS
T09314
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03030
DNA replication
aest03430
Mismatch repair
aest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH94_15585
03430 Mismatch repair
RBH94_15585
03440 Homologous recombination
RBH94_15585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aest03032
]
RBH94_15585
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_15585
Enzymes [BR:
aest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH94_15585
DNA replication proteins [BR:
aest03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBH94_15585
DNA repair and recombination proteins [BR:
aest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBH94_15585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DEDDh_C
DUF7508
T5orf172
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WMI65473
LinkDB
All DBs
Position
3630515..3631879
Genome browser
AA seq
454 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKYDGHQVVDQFISLVNPEREIQPFVVNLTGINSNM
LRNAPKFYEIAKRIVEITEDCILVAHNAQFDYRILGTEFRRLGFDYIRPSLCSVELSKQL
IPGQPSYSLGKLVRSLGIPVSDRHRASGDALATLKLFKLLLDKDSSKSIIQQSIKLNPKH
QLEPRHLDILADLPSETGVYYIHNAEGNIIYIGKSKNIKKRINQHFTNTNRKSKQIQNLV
DSVSYETTGSELVALLKESEAIKTIKPKFNRALRRTRFTHALYSFTDDNGYINLKIDIAD
GRKKPITTFSNRDSGKSFINHAVEDYNLCQKLTGIYQTKTSCFNYDIKACNGACIGKESP
ESYNERVSKLITKNSYANQNMVIIDRGRDIDERSAILIENGVFKGIGFFNLNYQINNIEI
LQSIITPMQNNRDTQHIIQSYLRKNKKLKVVNFD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcgatattagacatagaaactactggcggtaagtataatgaggaaggcattacc
gaaattgcaatctataaatacgatggtcatcaagttgtcgatcaatttataagtcttgta
aatccggagcgagaaattcaacctttcgtcgttaaccttacaggtattaatagcaacatg
ctgcgtaacgcgccaaagttttacgaaatagcgaaacgtattgtggaaattaccgaagat
tgcattctggtggctcataatgcgcaattcgattaccgcattttaggaacagagttcaga
cgcttagggttcgactacattcgtccgtctctgtgttctgtagaactttctaaacagctt
attccggggcaaccttcgtatagtttaggtaaattagtaaggtctttggggattccggta
agcgatcgtcacagagcatccggtgatgcactggctacgcttaaacttttcaaattattg
ctggataaagacagctctaaaagtattattcagcaatctattaaactaaatcctaagcat
cagctcgaaccacgtcatttagatattttagccgacttaccttctgaaaccggagtgtac
tacattcataatgctgagggtaacattatttacatcggaaagagtaaaaacataaaaaag
cggattaatcagcactttacaaacaccaatcgtaaatctaaacaaatacagaatttagtc
gattcggtaagttacgaaactaccggtagtgaactcgttgcgcttttaaaggaaagtgaa
gcgataaaaaccatcaagcctaaatttaaccgggcgcttcgtcgaacccgttttacgcat
gcgctttatagttttacagatgataacggctacatcaacctaaaaattgatattgccgat
ggtcgcaaaaaacctattactacatttagcaacagggatagcggtaaaagttttatcaat
catgcggttgaagactacaatctatgccaaaaactaaccggaatttaccaaactaaaacc
agttgttttaattacgatattaaagcatgtaacggtgcttgtataggtaaagaatcacct
gaaagttataacgaacgtgtttctaaattaataacaaaaaacagctatgctaaccaaaat
atggtcatcattgacagaggccgtgatattgatgaacgcagtgctattttaattgaaaac
ggagtatttaaaggtattggattttttaatctaaactaccagataaataatatagaaatt
cttcaatctattataacgcccatgcagaataatagagatacccaacacataattcaaagt
tatttaagaaaaaataagaaattaaaggttgtaaattttgattaa
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