Arsenophonus apicola ArsBeeUS: LDL57_00925
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Entry
LDL57_00925 CDS
T07906
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aet
Arsenophonus apicola ArsBeeUS
Pathway
aet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL57_00925 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aet03019
]
LDL57_00925 (rhlB)
Enzymes [BR:
aet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDL57_00925 (rhlB)
Messenger RNA biogenesis [BR:
aet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LDL57_00925 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UBX29300
LinkDB
All DBs
Position
complement(226642..227928)
Genome browser
AA seq
428 aa
AA seq
DB search
MSKTHLTEKKFIDFALHPKVIEALNKNGFHNCTPIQASTLPFTVEGRDVAGQAQTGTGKT
LAFLTSTFHYLLTHPTNTERQVNQPRALIMAPTRELAVQIYSDAKELAAITGLKMGLAYG
GDGYDEQLHVLQSGVDILIGTTGRLIDYAKQGHIHLGLIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNLLFSATLSYRVQELAFEQMNQPEYIEVEPQQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPERCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILE
QFTQGHLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYSLNLPAIEEYIQHQIPVSKYNSEALLQDLPMPKPRRRPLTNGTRRNNSSQSRQNNS
RNNRKRPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacacatttgacagaaaagaagtttatagacttcgccctacaccctaaagtt
attgaagcccttaataaaaatggctttcataattgtacgccgatacaagcgtcaacattg
ccttttactgtcgaaggccgtgatgttgcggggcaagcacaaacaggaacaggtaagaca
ttggcttttcttacctcaacatttcattatttacttacacatccaacaaatacagaacgt
caagttaatcaaccgagagcgctaattatggctcctacacgggaattagccgttcagata
tattctgatgcaaaagaattagccgctataacaggcttaaaaatgggcttagcttatggt
ggtgatggctacgacgaacaactgcatgtgctccaatcgggagtagatattctcatcggt
acaaccgggcgcttaatcgattatgctaaacaaggccatattcatttaggactcattcag
gtggttgtacttgatgaggctgaccgcatgtatgatcttggttttattaaagatattcgt
tggctatttcgtcgaatgccacccgccacccaacgcttaaatttacttttttccgcaaca
ctttcttatcgtgttcaagaactggcatttgaacaaatgaatcaaccggaatatattgag
gtagaacctcaacaaaaaacaggtcatcgcattaaagaagaacttttctatccttctaat
gaagaaaaaatgcgtctgttacaaacgttaatcgaggaagagtggcccgaaagatgtata
atttttgctaatactaaacatcgctgtgaagatatctgggcccatcttgctgctgatggt
caccgtgttggcttactgactggcgatgtggcacaaaaaaaacggctacgtattcttgaa
cagtttactcaaggccatttagatatcttagttgcaacagatgttgccgccagaggttta
catatcccatctgtcacgcatgtatttaattacgatctacctgatgattgcgaagattat
gttcatcgtattggccgtaccggacgagcgggtgaaagcggtcattcgattagtttggct
tgtgaagagtattctttaaatctacctgctattgaagagtatattcagcatcaaattcct
gtcagtaaatataacagtgaggcattattacaagatttaccgatgccaaaaccacgtcgt
cgtccgcttactaacggcacacgtcgaaacaatagtagccaaagcagacagaataattca
cgcaacaatcgtaaacgtccgagctaa
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