Arsenophonus apicola ArsBeeUS: LDL57_00935
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Entry
LDL57_00935 CDS
T07906
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aet
Arsenophonus apicola ArsBeeUS
Pathway
aet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL57_00935 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aet03021
]
LDL57_00935 (rho)
03019 Messenger RNA biogenesis [BR:
aet03019
]
LDL57_00935 (rho)
Transcription machinery [BR:
aet03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LDL57_00935 (rho)
Messenger RNA biogenesis [BR:
aet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LDL57_00935 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
UBX29302
LinkDB
All DBs
Position
228959..230218
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAANIANNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDFMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattgaaaaatacgccggtatctgaattgattactcttggcgaaagt
atggggctagagaacctagcccgcatgaggaaacaggatattattttctcgattttgaag
caacatgctaaaagtggagaagatatttttggtgatggcgtgctagaaattttgcaggat
ggatttggattccttcgttctgctgacagctcttatctagccggtcctgacgatatttat
gtttctcctagtcaaattcgtcgttttaatctacgaacgggagataccatatcaggaaaa
attcgtcctcctaaggaaggcgaacgctattttgccctactaaaagttaatgaagtcaat
tttgataaacctgaaaacgctcgtagtaaaatcctgtttgaaaacctgacaccgctacat
gctaataaccgtttacgtatggagcgtggcaatgggtcaacagaagatttgacagctcgt
gttttggatttggccgccccgattgggcgtgggcagcgtggtttaattgttgctccacca
aaagcaggtaaaaccatgttattgcagaatattgcagctaatattgccaataactatcca
gactgtgttttgatggtgttgttaattgatgagcgacccgaagaagtgaccgaaatgcaa
cgcctggttaaaggtgaggtcattgcatcaacctttgatgaacctgcatctcgccacgtt
caggttgctgaaatggtaatagagaaagctaagcgtttagttgaacacaaaaaagatgtc
attattcttttagattcgattacgcgtcttgctcgtgcttacaacacagtggttccttcc
tctggaaaagtattaactggtggggtggatgcaaatgcactgcatcgcccaaaacgtttt
tttggtgcggcacgtaatgtagaagaaggtggaagcctaacgataattgctacagcacta
gttgatactggctctaaaatggatgaagtgatctacgaagagtttaaaggcaccggaaat
atggagttacatttgtcgcggaaaatagcggaaaaacgtgttttcccggcgattgattat
aatcgttccggtacgcgtaaggaagaattattaaccttacctgatgagttacagaaaatg
tggatattgcgcaaaattattcatcctatgggtgaaattgatgcaatggaatttttaatt
aataaattagcaatgacgaagaccaatgatgaatttttcgatttcatgaaacgttcttaa
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