Arsenophonus apicola ArsBeeUS: LDL57_01415
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Entry
LDL57_01415 CDS
T07906
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aet
Arsenophonus apicola ArsBeeUS
Pathway
aet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL57_01415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aet03019
]
LDL57_01415
03009 Ribosome biogenesis [BR:
aet03009
]
LDL57_01415
Enzymes [BR:
aet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDL57_01415
Messenger RNA biogenesis [BR:
aet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LDL57_01415
Ribosome biogenesis [BR:
aet03009
]
Prokaryotic type
rRNA helicases
LDL57_01415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
UBX29387
LinkDB
All DBs
Position
330375..332207
Genome browser
AA seq
610 aa
AA seq
DB search
MTNETEISFADLGLSTPILSALNDLGYEKPSPIQQQCIPYLLDGCDVLGMAQTGSGKTAA
FSLPLLHNIDITLKAPQILVLAPTRELAVQVAEAMGEFSKHMRSVNVVALYGGQRYDSQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSHLRGLVLDEADEMLRMGFIEDVENIMSQIPS
EHQTALFSATMPEAIRRITRRFMKSPKEISIQSSVTTRPDITQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSSALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKQPITEVELPSAAVLSERRQAKFAENIQKQLESGDLEKYRALLTKLVANDELDME
TLASALLKMAQGDRPLILPPDPVRRAKREFNSRDERRRSNSNGTSERSPRRERRDVGDME
LYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFASHSTIELPKGMPNELLNHLTR
TRILNKPMQMQLLGEAQPFERRGNGQRNGGELRERGRRFGNERRSEREQFRGRNEGHNNA
GLRRRSNHNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgagactgaaatctcttttgctgatttaggtttatcaacaccaattctttct
gcactaaatgaccttggttatgaaaaaccatcgccaatccagcagcaatgtatcccctat
ttattagatgggtgtgacgtattaggtatggcacaaaccggtagtggtaaaacagcagct
tttagtttaccgctcttacataatatagatatcacattgaaagccccacaaatcttagtg
ttggcaccaacgcgggagttagccgtacaagttgcggaagccatgggtgaattttccaaa
cacatgcgttcagtcaatgtggtcgcactctatggtgggcagcgttacgattcgcagtta
cgcgcactaagacaaggcccacaaattgtagtgggaacaccaggtcgcttattagatcac
ttgaaaagagggacattaaatttatcccatttacgtggtttggttcttgatgaagcggat
gaaatgttacgtatggggttcattgaagacgttgaaaatatcatgagccagatcccaagc
gagcatcaaacggcgctgttttctgccaccatgccggaagcgatccgtcgtattacccgt
cgctttatgaaatctccaaaagagatcagcattcaatccagtgtgacgacgcgcccagac
attacccaaagttactggtctgtctatggtatgcgtaaaaatgaagcattggttcgtttt
ttggaagcagaagattttgatgcggcaattatttttgtgcgcactaaaaatgccacatta
gaggttgctgaagcgcttgaacgtagtggctataacagttcagcgctaaatggcgatatg
aatcaagcgctacgtgagcaaacattagagcgtttaaaagatggtcgccttgatatatta
attgccactgatgttgcagcacgtggtctagatgttgaacgtattagtttagttgtcaat
tatgacataccaatggatgctgagtcttatgtgcatcgaattggtcgtactggtcgggca
ggtcgagctgggcgcgctattttgtttgtggataatcgtgaacgtcgactattacgtaat
atagaacgtaccatgaagcagccaattaccgaagttgagttacccagtgcggcggtttta
agtgaacgtcgccaagctaaatttgctgaaaatattcaaaagcaactagaaagtggtgat
ttagagaaatatcgagcgttactgactaaattagttgctaatgatgaactggatatggaa
actttagcttctgcgctattaaaaatggcgcaaggggatcggccgttaatattgccacct
gatcctgtgcgtcgcgcaaaacgtgaatttaattcgcgtgatgagcgtcgtcgcagtaat
agtaatggtacttcggagcgtagtccgcgtcgggagcgtcgtgatgttggtgatatggaa
ttgtaccgtattgaagttggtcgtgatgatggcgtagaagttcgccacattgtcggtgca
attgctaacgaagcggatattagtagtcgttatattggtaatattaagttgtttgcctcg
cactcaacgattgagttaccaaaaggaatgccaaatgaactacttaatcatttgacacgt
acacgtattttgaataagccaatgcaaatgcaattgttaggtgaagcacaaccatttgaa
cgtcgtggtaatggacaacgcaatggtggtgaattacgtgagcgaggacgtcgctttggt
aacgaacgtcgtagtgagcgtgaacagttccgtggacgtaatgaaggacataataacgct
ggattacgtcgtcgtagtaatcacaatatctaa
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