Arsenophonus apicola ArsBeeUS: LDL57_05980
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Entry
LDL57_05980 CDS
T07906
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aet
Arsenophonus apicola ArsBeeUS
Pathway
aet03030
DNA replication
aet03430
Mismatch repair
aet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL57_05980 (holB)
03430 Mismatch repair
LDL57_05980 (holB)
03440 Homologous recombination
LDL57_05980 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aet03032
]
LDL57_05980 (holB)
03400 DNA repair and recombination proteins [BR:
aet03400
]
LDL57_05980 (holB)
Enzymes [BR:
aet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL57_05980 (holB)
DNA replication proteins [BR:
aet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDL57_05980 (holB)
DNA repair and recombination proteins [BR:
aet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDL57_05980 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Jiv90
NEW1_HB
DUF6587
DUF6966
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
UBX30154
LinkDB
All DBs
Position
1294861..1295850
Genome browser
AA seq
329 aa
AA seq
DB search
MNWYPWLNHAYRQIIAMHQNKQGHHALLLHANAGMGSEALVYAISRWLICQQPSAMKSCG
SCHSCQLMLAKTHPDWYKIDAEKGKNTIGIESIRYLTEVLVSHAQQGGAKVIWFPRIEAL
TEAASNALLKTLEEPTNNTYFLLECRDPALLLATLRSRCFYYYLPAPEHKTAISWLQKQK
ISLALVDIETAIKLNAAAPLAALALLQPENWQKRKQFCQSLMQHLATKTLFSWLPELDQP
DAVERINWLISLLLDAVKYQQQAGNYCVNQDQPSLITKLAAINTADVLLKSAMEWQSCRY
QLMSVMGLNQELRLASQLINWQRALYHQN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccatggttaaatcatgcatatagacaaataattgctatgcaccaaaac
aagcaagggcatcatgcattgttgttacatgctaatgctggaatgggaagtgaggcactc
gtttatgctattagccgatggctaatatgccaacagccgtcggcgatgaaaagctgtggt
agttgtcatagttgtcaactaatgttagcaaagacgcatccagactggtataaaattgac
gccgagaagggtaaaaatacgataggtattgaaagtattcgttatttaaccgaagtttta
gttagccatgcacagcaaggtggcgctaaagttatttggtttcctcgtattgaagcatta
accgaagcggcaagtaatgcgttattgaaaactttagaagaaccgacgaacaatacctat
tttttgttagagtgtcgtgatcctgcactattgctagctactttacgtagtcgctgtttc
tattattatcttcctgcgccggagcataaaacggctatttcttggctacaaaaacaaaaa
atatcgttagcgttagttgatattgaaacggccataaaacttaatgcggcagcacctctg
gctgcgttagccctgttacagccagaaaattggcaaaaaagaaagcaattctgccaatca
ctgatgcaacatttagcaactaagacacttttcagttggttacctgaattggatcagcca
gatgcagtcgaacggatcaattggttgataagtctattgttagatgcagtaaaatatcaa
cagcaagcaggtaattactgtgttaatcaagatcagccatcattaattactaaattggcc
gctattaatactgctgatgtcttattaaaaagcgcgatggaatggcaaagttgtcgttat
caattaatgtcagtgatggggttaaatcaggaattacgattggcatctcagttaattaac
tggcagcgcgcactatatcaccaaaattaa
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