Arsenophonus apicola ArsBeeUS: LDL57_08165
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Entry
LDL57_08165 CDS
T07906
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aet
Arsenophonus apicola ArsBeeUS
Brite
KEGG Orthology (KO) [BR:
aet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aet03016
]
LDL57_08165 (rnd)
Enzymes [BR:
aet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LDL57_08165 (rnd)
Transfer RNA biogenesis [BR:
aet03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LDL57_08165 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DUF7219
Motif
Other DBs
NCBI-ProteinID:
UBX27871
LinkDB
All DBs
Position
complement(1741975..1743099)
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AA seq
374 aa
AA seq
DB search
MNYQLITTDAQLKEVCQAASKANKIALDTEFVRVKTYYPQLGLIQLYDGEQVSLIDPIAI
TNLDPFKNLLTDGKVTKILHAGSEDIEVFFHHLACVPQPMLDTQIMAAFVGHPISTGFAS
LVNEYLTIALDKSESRTDWLVRPLSDKQCQYAAADVFFLLPLAEKLQQLIDTLGYLPAAT
DECQRILLRRQEILTPEDAYKSIKNSWQLRAQQLACLKQLAAWRLNQARRRDLAVNFVVR
EEHLWKIARYLPNSSAELQTIGLTGQEIRCHGQELLRIVSKCYDLEEKACPAPLYHLIDH
PKYREAFKAIKELTKQVGEQQKLNSELLASRRQINQLLAVHWGLKKSHNTPDLLAGWRGQ
LLNNPLKKLLELYP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgattacgacagatgctcaacttaaagaagtttgtcaagcagcatcg
aaagctaacaaaatagcacttgatacagaatttgttcgggtaaaaacttactatccacag
cttggtcttattcagttatatgatggtgagcaagtttcattaattgatcctattgccatt
actaatttggatccatttaaaaatttattaaccgatggcaaagttactaaaatcttacat
gcgggtagtgaggacatagaagtattttttcatcatttggcttgtgttccccagccgatg
ttagatacacagattatggcggcatttgttggccatccaatttcaaccgggtttgctagc
ttagtaaatgaatatttgactattgcattagataagagtgagtcacggacagactggctt
gttcggccattgagtgataaacagtgtcaatatgcggccgctgatgtgttttttttatta
cctttagctgaaaaactacaacagcttattgacacattaggttatctaccggctgcaact
gatgaatgccagcgtattttactacgtcggcaagagatattaaccccggaagatgcatat
aaaagtatcaaaaatagttggcaactgcgcgctcaacagctggcctgtcttaaacaatta
gctgcctggcggcttaaccaggctcgtcgacgtgatttggcggttaattttgttgttaga
gaagagcatctgtggaaaatagcgcgttacttacctaattcttcagcggaactacagaca
atagggttaactggacaggagatccgttgtcatgggcaggaactattgcgaatcgttagc
aagtgttatgacctggaagaaaaagcgtgtccagcgccactttatcatcttatcgatcac
cctaaatatcgagaagcgtttaaggccattaaagaattaaccaaacaagttggtgagcaa
caaaaattgaatagtgagttgttagcctcacggcgtcaaattaatcagttattggccgtt
cattggggattaaaaaagagccataatacaccagatctgcttgctggatggcgtggacag
ctgctgaataatcctttaaaaaagttattagaactatatccttag
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