Actinobacillus equuli subsp. equuli: ACEE_02320
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Entry
ACEE_02320 CDS
T03501
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aeu
Actinobacillus equuli subsp. equuli
Brite
KEGG Orthology (KO) [BR:
aeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeu03019
]
ACEE_02320
Enzymes [BR:
aeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACEE_02320
Messenger RNA biogenesis [BR:
aeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACEE_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
AAA_22
HA2_N
AAA_23
nSTAND3
ResIII
NACHT
SLFN-g3_helicase
T2SSE
NTPase_1
ABC_tran
RsgA_GTPase
SRP54
AAA_30
PhoH
AAA_25
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIZ78630
LinkDB
All DBs
Position
complement(511578..515477)
Genome browser
AA seq
1299 aa
AA seq
DB search
MKPSQKNFKNRPLDESQKALIANLKELTNTDYRRLRSRIHGISAIKKQETKNNVIAEIKR
EILSAQAAFQARKVQHSSLEITYPDLPVSARREEILKLIAENQVVVIAGETGSGKTTQLP
KMCLELGRGVKGLIGHTQPRRLAARSVANRIAEELKSEMSATVGYKVRFNDQVGENTLVK
LMTDGILLAEIQNDRYLNQYDTLIIDEAHERSLNNDFILGYLKQILHKRPDLKVIITSAT
IDVERFSRHFNNAPIIEVSGRTFPVEVRYRPIVEEDDQDQLQGILNAVDELQAEGRGDIL
IFMSGEREIRDTAEALQKQELRFTEILPLYARLSAAEQQRIFQPSGLNRVILATNVAETS
LTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTSEGICIRLYSE
EDFNARPEFTDPEILRTNLASVILQMTSLGLSDIEAFPFVDRPDTRQVQDGIRLLEELGA
INGNKLTAIGRQLAQLPIDPRLGRMVIAAAQNGSLHEVMMIVSALSIQDPRERPQERQQA
ADEKHRRFADKDSDFLAFVNLWHYIQTQQKELTKNQFRKQCQKDFLNYLRVREWQDIYHQ
LRLAVREMGLPINSEEANYQQIHTALLTGLLSHIGMKDSEKMHYLGARNAHFYVFPTSAL
FKKQPKWLAASELVETTKLWARTVAKIEPEWIEPLAGHLIKRSYSEPHWSKSKGAVMAYE
KVSLYGIPVVANRLVNYGSIDPTVSREIFIRSAMVEGDWHNNYKFFKENNRLIKEVEDLE
HKSRRRDILVDEQTLFDFYDQRIGTEVVSSRHFDTWWKKAGQKDPELLNFEKSFLMNENA
NTVSDLDFPNFWYQGQLKLKLSYQFEIGKDHDGVTVHIPLPLLNQVEPEGFDWQIPGLRH
ELVVALIKSLPKATRRNFVPAPNYADAFLGRAEPYQKPLLESLAYELRRMTGVTIDPELW
DLSQLAPHLRMTFRVVDEKGKKLQESENLDELKFALKDQVQESLSTIADDGIEQSGVHLW
NFANLPQFYEQKKANFSVKAYPAIVDEQTAVGVKLFETEFEQARAMRAGLRRLLLLNVPS
PIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAVDKLVDEFGGFVWTEEKFNELHEF
VRGSLNDTTAEIALQVEKILTLAFELNKRMKGKMDFTMAFALSDIKAQLSGLVYPDFVTK
TGYQRLADLHRYLTAIDKRLDKLGTDTNTDRAKMLRVEQVENAYKQLLTKLPKSKAIPDE
VLEIRYMIEELRVSLFAQQLGTKYPISDKRILNAIGEIK
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttcgcaaaaaaatttcaaaaatagaccgcttgatgagagtcagaaagcatta
atcgcaaatttaaaagaactcactaataccgattaccgccgtttacgttctcgtattcac
ggtatttctgccatcaaaaaacaagaaactaaaaacaatgtgattgcggaaattaaacgt
gaaattctctcggcacaagcagctttccaagccagaaaagtacaacattccagccttgaa
atcacttatcccgatttaccggtttccgctcgtcgtgaagaaatcttaaaactgattgca
gaaaatcaggtggtggtgattgccggtgaaaccggttcaggtaaaaccactcagctaccg
aaaatgtgcttggaactcggacgtggcgtaaaaggcttgattggacatactcagccccgc
cgtttagccgctcgttcggtggcgaatcgtattgccgaagaattaaaaagcgaaatgagt
gcaactgtcggttataaagtacgctttaatgatcaagtgggcgaaaatacccttgtgaaa
ttgatgacggacggtattttgcttgccgaaatccaaaacgaccgctatctcaatcaatac
gatacgttaattattgacgaagcgcacgaacgctcgctcaataacgattttattcttggc
tacctgaaacaaattctgcataaacgcccggatctgaaagtgatcattacctcggcgacc
attgatgtcgagcgtttttctcgccatttcaacaatgcaccgattattgaggtttccgga
cgaaccttcccggtagaagtgcgttatcgtccaattgtggaagaagatgaccaagaccaa
ctacaaggtattctcaacgctgttgatgaacttcaagccgaaggtcgcggcgatattttg
atttttatgagcggtgagcgtgaaattcgtgacactgccgaagccctacaaaaacaagag
ctaagattcactgaaattctaccgctttacgctcgcctctcggctgccgaacagcaacgc
attttccagccaagcggtctgaatcgtgtgattttagccaccaacgtggcggaaacctca
ctcaccattccgaatatcaaatatgtgattgataccggtacggcacgtatttctcgctat
agctaccgcaccaaagtgcaacgtttgccgattgagccgatttcacaagcctctgccaac
cagcgcaaaggccgttgcggacgaaccagtgaagggatttgtatccgcctctattcggag
gaggattttaacgcgcgtccggaatttaccgatccggaaattctgcgtactaaccttgct
tcggttattttacaaatgacctcgcttgggctatcggatattgaggcatttccattcgtt
gatcgtccggataccagacaggttcaggacggtattcgtttactagaagaattaggggcg
attaatggtaataaattaaccgcgatcggtcgccaacttgctcaactcccaatcgatcct
cgcttaggccgtatggtcattgccgcggcacaaaatggttcgttacacgaagtgatgatg
attgtctccgcactttcgattcaagatccgcgtgagcgcccgcaagaacgccaacaggct
gcggatgaaaaacatcgccgttttgccgataaagattccgatttcttggcgtttgtgaat
ttgtggcattacattcaaacccaacaaaaagaactgaccaaaaaccagttccgcaagcaa
tgtcaaaaagattttctcaactatttacgtgtgcgtgaatggcaggatatttatcatcaa
ttgcgccttgccgtgcgtgaaatgggcttgccgattaatagtgaagaagcaaactatcag
caaattcacactgccttactaaccggtttgctgtcgcatatcgggatgaaagacagcgaa
aaaatgcactacctcggggcaagaaatgcgcatttttatgtattcccgacctcggcgctt
ttcaaaaagcagccgaagtggcttgctgcgtccgaactggtagaaaccaccaagttgtgg
gcaagaactgtggcaaaaatcgaaccggaatggattgagccactcgccggacatttaata
aaacgtagttatagtgaaccgcattggtcaaaatctaaaggtgcggtgatggcgtatgaa
aaagtctcgctctacggtattccggtggtagcgaatcgtcttgtcaattacggttcaatt
gatccgactgttagccgcgaaatatttatccgctcggcaatggttgagggcgattggcat
aataattacaaatttttcaaagaaaataaccgcttgatcaaagaagtggaagacctcgaa
cacaaatctcgccgccgagatattttagtggacgaacaaaccctgttcgacttctacgat
caacgaatcggaacagaagtggtatccagccgccattttgatacatggtggaaaaaagcg
ggtcaaaaagatcctgaattgctcaactttgaaaaatcattcttaatgaatgaaaacgcc
aacacggtcagcgatttggatttcccgaatttttggtatcaagggcagcttaaactgaaa
ttaagttaccaatttgaaatcggtaaagatcacgatggtgtcaccgtgcatattccgtta
cctttacttaatcaagtagagccggaaggcttcgactggcaaattccagggcttcgccat
gagctagtggtggcgttaattaaatcattaccgaaagcaactcgccgtaattttgtaccg
gcaccgaactatgcagatgcgttcttaggcagagccgagccgtatcaaaaaccattgcta
gaaagtctggcttacgagcttcgccgtatgaccggtgtaactattgatccggagctgtgg
gatctgtcgcaacttgcgccgcatttgcgtatgacattccgtgtggtggatgaaaaaggt
aaaaaactacaagaaagcgaaaacttggacgaactgaagtttgcgctcaaagatcaggta
caagaaagcctttcgacgattgctgatgacggtatcgagcaaagcggcgtacatttgtgg
aatttcgctaacttaccgcaattctacgaacagaaaaaagctaatttcagcgtaaaagcc
tatccggcaattgtcgatgagcaaactgccgtaggcgtgaaattatttgaaaccgaattt
gagcaagcccgtgcaatgcgagccggtttacgccgtttgctattgctcaacgtgccttcg
ccaatcaaatacctacacgaaaaattaccgaacaaagcaaaacttgggctgtactttgcc
ccattcggtaaagtgttggaattgattgatgactgtatcgcttgtgcggtggataaattg
gtggatgaattcggcggctttgtttggaccgaagaaaaattcaatgaattgcatgaattt
gtgcgaggcagcttaaacgacactaccgcagaaattgcgttacaagtggagaaaatctta
acacttgccttcgagctaaataagcgaatgaaaggcaaaatggactttacaatggctttt
gccctgtcggatattaaagcacaattaagcggtttggtttatccggattttgtaaccaaa
accggctatcaacgccttgccgatttacaccgttatttaaccgctatcgacaagcgtttg
gacaaactcggcacggacaccaataccgaccgagcgaagatgttacgggtggaacaggtg
gaaaacgcttataagcaattactcaccaaactcccgaaatctaaagcaatccctgacgaa
gtgttagaaattcgttatatgattgaagagttacgtgtcagtttgttcgcccaacaactc
ggcaccaaatacccgatatcggataaacgtattttgaatgcgattggagagataaaataa
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