Actinobacillus equuli subsp. equuli: ACEE_03705
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Entry
ACEE_03705 CDS
T03501
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aeu
Actinobacillus equuli subsp. equuli
Pathway
aeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEE_03705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aeu03400
]
ACEE_03705
DNA repair and recombination proteins [BR:
aeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEE_03705
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACEE_03705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Mu_Gam-Sipho_Gp157-TOTE
UB2H
DUF87
EAD9
DUF5683
Motif
Other DBs
NCBI-ProteinID:
AIZ78892
LinkDB
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Position
786003..788024
Genome browser
AA seq
673 aa
AA seq
DB search
MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAQLN
RPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAIIDQREILARLA
ELQYTRNDQAFQRSTFRVRGEVIDIFPAESDEIALRVELFDDEIESLSLFDPLTGHSLGK
VPRYTIYPKTHYVTPRERILNAIEEIKQELVERREYFIKENKLLEEQRITQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEPPPTLFDYMPADGLLIIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGNYELEKSNGDVVDQVVRPTG
LLDPIIEVRPVATQVDDVLSEIHKRVAVDERVLITTLTKKMAEDLTDYLDEHGVRVRYLH
SDIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQ
TIGRAARNLNGKAILYGDRITNSMQKAITETERRREKQQKYNEEHGITPQALNKKVGELL
DIGQTDKPKRGKQAVKIEEKSANTYKPKSRKELEKELKQLEQQMRDFAKDLEFEKAAAVR
DKIGQLKAYLLEI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaggcaaaccttttattttacatagcccgtttaaaccctctggcgatcag
ccatcagcgattgctaaattgaccgaagggttaaatgatggattggcgcatcaaacgtta
cttggcgtaaccggttcaggtaaaacctttaccattgcgaatgtgatcgctcaactcaat
cgtccggcaatgttgcttgcgccgaataaaacgcttgccgcccagctgtatgcggagatg
aaagccttcttccctgaaaatgcggtggaatacttcgtgtcttactatgattattatcaa
ccggaagcctacgtgccgagtagcgatacttttatcgaaaaagatgcgtcgattaatgaa
caaatcgaacaaatgcgactgtcggcaaccaaatctttccttgaacgccgagataccatt
gtagttgcttctgtttccgccatttacggcttgggggacgtggacgcttatatgcaaatg
atgttgcatttgcaagtgggggcgattatcgatcaacgagagatcctcgctcgtcttgcc
gaattgcaatatacccgtaacgatcaagcattccagcgttcgactttccgtgtgcgtggc
gaagtgattgatattttcccggctgaatcggatgaaattgcgttacgtgtcgaattattt
gacgatgaaatcgaaagtctctcgttatttgatccgcttaccggacatagtttgggcaaa
gtacctcgctataccatttatccgaaaactcactacgttacccctcgtgaacgcattttg
aatgcgattgaagaaatcaaacaagagttggtagaacgccgtgagtatttcatcaaggaa
aataaattgctggaagaacaacgcattacccagcgtacgcaattcgatattgaaatgatg
aatgagctgggctattgctcgggtattgaaaactattcacgctatctgtcaggcagaaaa
gagggtgaaccgcctccgactttgttcgattatatgccggcggacggtttgctgattatt
gatgaaagccacgttaccgtaccgcaaatcggcggtatgtatcgaggcgaccgagccaga
aaagaaacactggtgcaatacggtttccgcttgccgtctgcattagataaccgcccactt
cgctttgaagaatttgaacgccttgccccacagacgatttatgtgtcggcaacaccaggt
aattacgaactagaaaaatcaaatggcgatgtggtcgatcaagtggttcgcccaacggga
ttattagacccgatcatcgaagttcgtccggtcgctacgcaagttgatgacgtgctatcc
gaaattcacaaacgagtggcggtcgatgagcgtgtattgatcacaacactgaccaaaaaa
atggcggaagatttaaccgattacctcgatgaacacggcgtgcgtgtgcgttatctgcat
agcgatattgatacggttgaacgggtggaaattattcacgacttgcgtatgggaatgttt
gacgtattggtcggcatcaacttattgcgtgagggtttggatatgccggaagtatcgctg
gtggcgattttagatgcggataaagaaggctttttacgttccgaacgttcattaattcag
accatcggacgtgccgctcgaaacctcaacggcaaagcgattctctacggcgaccgcatt
accaattctatgcaaaaagcgattaccgaaaccgaacgccgccgagaaaaacaacaaaaa
tacaacgaagaacacggtattactccgcaagccctcaataagaaagtaggcgaattgctc
gacatcggacaaaccgacaagccgaaacgaggtaaacaagcggttaaaatcgaagaaaaa
tctgcaaatacctataaaccaaaatcccgcaaagagctggaaaaagaactcaaacagtta
gaacaacaaatgcgagatttcgctaaggatttagagtttgaaaaagcggcggcggtaagg
gataagattggacagttgaaggcgtatttgttagaaatttag
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integrated database retrieval system
