Actinobacillus equuli subsp. equuli: ACEE_04270
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Entry
ACEE_04270 CDS
T03501
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aeu
Actinobacillus equuli subsp. equuli
Pathway
aeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEE_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeu03019
]
ACEE_04270
03016 Transfer RNA biogenesis [BR:
aeu03016
]
ACEE_04270
Enzymes [BR:
aeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACEE_04270
Messenger RNA biogenesis [BR:
aeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACEE_04270
Transfer RNA biogenesis [BR:
aeu03016
]
Prokaryotic type
tRNA degradation factors
ACEE_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
S1_2
KH_SLS1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AIZ78997
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All DBs
Position
913023..915164
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AA seq
713 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTISEQKQSRLDLVVAG
TDKAVLMVESEADILSEEQMLSAVVFGHQQQQVVIENIKEFVKEAGKPRWDWVAPEPNTA
LINQVKALAEARIGDAYRITEKQARYEQIDTIKADVIAQLTAQDETISEGAIVDIITALE
SSVVRGRILAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVLAVMPTAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQAI
PAPRADISDFAPRIHTMKIDPKKIKDVIGKGGAVIRALTEETGTSIDIDDDGTVKIAATD
NNAAKIVMARIEDIVAEVEVNAIYKGKVTRVVDFGAFVSILGGKEGLVHISQITNERVER
VADYLSVGQEVTVKVVEIDRQNRIRLTMKDINNDAATPAEETEAQPQEQQAEI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaattgttaagcaatttaaatacggtcaacataccgtaacattagaaacaggt
gctatcgctcgccaagcaacggcggcagttatggcaagtatggacgatacgaccgtattc
gttactgtagtggctaaaaaagatgtaaaagaaggccaagatttcttcccattaaccgtt
aactatcaagaacgtacttatgcggctggtcgtattccgggtggtttcttcaaacgtgaa
ggccgtccgtctgaaggcgaaacattaatcgctcgtttaattgaccgtcctattcgccca
cttttcccagaaggctttttcaacgaaatccaagttgttgcaacagttgtttctgtaaac
cctcaaattagcccggatttagtggcaatgatcggtgcatcagctgccctctcattatca
ggcgtacctttcaacggccctatcggtgcagcacgtgttggtttcattaatgaccaattc
gtacttaacccaactatttcagaacaaaaacaaagccgtttagatttagtggttgccggt
acggataaagcggtattaatggttgaatctgaagcggacattctttctgaagaacaaatg
ttatctgcggtagtattcggtcatcagcaacaacaagttgtgattgaaaatatcaaagaa
ttcgtaaaagaagcgggtaaaccacgttgggattgggttgctccggagccaaatacggca
ttaatcaatcaagttaaagcattagcggaagctcgtatcggtgacgcataccgtatcact
gaaaaacaagcgcgttacgaacaaatcgatacaattaaagcggacgttatcgcacaatta
accgcacaagacgaaacgatttctgaaggtgcaatcgttgatatcattaccgctttagaa
agttctgtagttcgtggtcgtatccttgcaggtgaaccgcgtattgacggtcgtaccgta
gatactgttcgtgcattagatatttgcactggggttttacctcgtactcacggttctgca
atcttcacccgtggtgaaacgcaagcattagcggttgcaactttaggtactgagcgtgac
gcacaaattattgacgaattaaccggtgagaaatcagatcgtttcttattccactataac
ttccctccgtattctgtaggtgaaacaggtatgatcggttcaccaaaacgtcgtgaaatc
ggtcacggtcgtttagcgaaacgtggtgtgttagcagtaatgccgacagctgaagaattc
ccatatgtagtacgtgtggtttctgaaattaccgaatcaaacggttcttcttcaatggct
tctgtatgtggtgcatctttagcattaatggatgccggcgtgccaattaaagcggctgtt
gcgggtatcgcaatgggcttagtaaaagaagaagaaaaattcgtcgtactttcagatatc
ttaggtgatgaagaccacttaggtgatatggactttaaagtagccggtactcgtgaaggt
gtaactgcgcttcaaatggacattaaaatcgaaggtattacaccggaaattatgcgtatt
gcattaaaccaagcgaaaggtgctcgtatgcacatccttggcgtaatggaacaagcaatt
ccggcacctcgtgcagacatttctgattttgcgcctcgtatccacacaatgaaaattgat
ccgaagaaaataaaagatgttatcggtaaaggtggtgcggtaattcgcgcattaacggaa
gaaaccggcacttcaattgatattgatgacgacggtacagtgaaaattgcagcaaccgat
aataatgcggcgaaaattgtaatggctcgtattgaagatatcgttgcagaagttgaagta
aatgcaatctacaaaggtaaagttactcgtgttgtagacttcggtgcatttgtttctatc
ttaggtggcaaagaaggcttagtgcatatttcacaaattacgaatgaacgtgttgaacgt
gttgccgactacttaagcgtaggtcaagaagtaactgtaaaagtggttgaaatcgatcgt
caaaaccgtattcgtttaacgatgaaagacatcaacaatgatgctgcaacaccagcagaa
gaaactgaagctcaacctcaagaacaacaagctgagatctaa
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