Actinobacillus equuli subsp. equuli: ACEE_04280
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Entry
ACEE_04280 CDS
T03501
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aeu
Actinobacillus equuli subsp. equuli
Pathway
aeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEE_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeu03019
]
ACEE_04280
03009 Ribosome biogenesis [BR:
aeu03009
]
ACEE_04280
Enzymes [BR:
aeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACEE_04280
Messenger RNA biogenesis [BR:
aeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACEE_04280
Ribosome biogenesis [BR:
aeu03009
]
Prokaryotic type
rRNA helicases
ACEE_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIZ78999
LinkDB
All DBs
Position
916397..918256
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AA seq
619 aa
AA seq
DB search
MTTNSLTFADLGLPQSILDAVNEIGFVNPSPIQQETIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFTKNMKGVRVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHIRRGTLDLSALQSIVLDEADEMLRMGFIDDVETVMAELPEN
HQTALFSATMPEPIRRITRRFMKDPQEVKIQATQRSAPDITQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDITELCERNGYRAAALNGDMTQQAREQTLEKLKSGRLDILV
ATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
EHLMKKPIDEVAIPNHEILMEKRREKFKARVSAQLEHHDLEKYRELLEDLFTADQDHEEL
AAAMMMMLQEKQKLILPPDPEIRAARSERGRRDRDDRRGGRDERRGGREHRENNGVAMDL
YRIELGREDGVEVRHIVGAIANEGDISSRYIGHIKLHDTYSTIELPQGMPNHIVQHFAQK
ARVLNKQMQMSLLGPAGGVNSQPFEERRGGGRRSDRNDRNDRRSDRGGRSDRREGGFNDR
KKSGFKEKRFNDKGRGRRD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaattctttaactttcgcagacttaggtcttccacaatcaatccttgacgca
gtaaatgaaatcggctttgtaaacccatcgccaattcaacaagaaacaatcccacattta
ttagctggtcgtgacgtacttggtatggcacaaaccggtagtggtaaaacagcggcattc
tctttaccgttacttgcacaaattgatccgacacaacgccacccacaaatgttagtgatg
gcaccaactcgtgaattagcaatccaagtagcagatgcgtgcgaacaatttactaaaaat
atgaaaggcgtgcgtgttgtaaccgtttacggtggtcaacgttatgacattcaattacgt
gcactaaaacaaggttcgcaagttgttgttggtactccgggtcgtattcttgaccatatt
cgtcgtggcacattagacctatctgcacttcaatctatcgtattagatgaagcggatgaa
atgcttcgtatgggctttattgacgacgttgaaaccgtgatggcggaattaccggaaaat
caccaaactgcgttattctctgctacgatgccagagccgattcgtcgtatcactcgtcgc
tttatgaaagatccgcaagaagttaaaattcaagcgacccaacgttctgcaccggatatc
acacaaagctactggttagtaaacggcttccgtaaaaatgatgcgttactacgtttctta
gaagtagaagaatttgatgcagcaattatctttactcgtaccaaaaccggcacaattgat
attactgaattatgtgaacgcaacggctaccgtgcggcggcattaaacggtgatatgact
caacaagcgcgtgagcaaacgttagaaaaattaaaatcaggtcgtttagatatcttagtg
gcaaccgacgtggcagctcgtggtatcgatatcgaacgtatcagccttgtagtgaacttc
gatattccgttagacgcggaatcttatgttcaccgtatcggtcgtaccggtcgtgcaggt
cgttctggtcgtgcattattattcgtagaacctcgtgagcgccgtttacttcgtaatatc
gaacatttaatgaaaaaaccgatcgatgaagttgcgattccaaatcatgagattctaatg
gaaaaacgtcgcgagaaattcaaagcacgtgtttcagcacagttagaacaccacgattta
gagaaataccgtgaattacttgaagatttattcactgctgatcaagaccatgaagaattg
gcagcagcaatgatgatgatgcttcaagagaaacaaaaattaattcttccgccagatccg
gaaattcgtgcagcacgtagcgaacgtggtcgcagagaccgtgacgatcgtcgtggtgga
cgtgatgaacgtcgcggcggccgtgaacaccgtgaaaataacggtgtagcgatggattta
tatcgtatcgaattaggtcgtgaagacggtgtggaagtacgtcatatcgtaggcgctatc
gctaatgaaggtgatattagcagccgttatatcggtcacattaaactgcacgatacttac
tctacgattgagttaccacaaggcatgccgaatcacatcgtgcaacactttgcacaaaaa
gcacgcgtgctaaataaacaaatgcaaatgtctttattaggccctgcaggcggtgtgaat
agtcaaccgtttgaagaacgccgtggcggtggtcgccgtagcgatagaaatgaccgcaat
gaccgtcgttctgatcgcggcggacgttcagaccgtcgtgaaggtggctttaatgaccgt
aaaaaaagcggttttaaagaaaaacgtttcaatgacaaaggtcgtggtcgtcgcgactaa
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