Actinobacillus equuli subsp. equuli: ACEE_11350
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Entry
ACEE_11350 CDS
T03501
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aeu
Actinobacillus equuli subsp. equuli
Brite
KEGG Orthology (KO) [BR:
aeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aeu03009
]
ACEE_11350
Enzymes [BR:
aeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACEE_11350
Ribosome biogenesis [BR:
aeu03009
]
Prokaryotic type
rRNA helicases
ACEE_11350
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIZ80328
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Position
2387991..2389328
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AA seq
445 aa
AA seq
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MTTETPFMTFEELDLAPQLLKALNKKGYKRPTAVQAETIPHALDGRDLLGSAPTGTGKTA
AFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAY
QNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIFDEADRMLQMGFGQDAEKIAA
ETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNLEHKT
KLLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKD
GVVNVLVATDVAARGIDIDDVDYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHD
YKLLGKIKRYTEELLKARVIEGLEPRTKAPKDGELNTTTKKEKARIKKRKEAKKEAAKAK
VKVRHKDTKNIGKRRKPTSEAAKSA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgaaaccccattcatgacctttgaggaattagatttagctcctcaactgtta
aaagcactcaataaaaaaggttacaaacgcccgaccgccgtacaagcggaaaccattcca
cacgcgcttgacggacgtgatttacttggttcggcaccaaccggcaccggcaaaactgcc
gcatttttattgccggcaattcaacatttattggattacccacgccgtaaaccgggcgca
cctcgtattttaattttaacgccgactcgtgagcttgcgatgcaagtagcggaagaagcg
caagcttttgccgaatttaccaagcttagtattgcgacgattaccggcggtgtggcgtat
caaaaccacggcgaagtgtttaacagcaaccaagatattgtggtcgcgacaccgggacgt
ttaatgcaatatatcaaagaagaaaattttgactgccgtgcggtagagattttgatcttt
gatgaagcagaccgtatgttacaaatgggctttggtcaagatgcggaaaaaattgcggcg
gaaacccgttggcgtaaacacacgtggttattctcggcaacgctggaaggcgagttattg
gtggattttaccgaccgtattttggataacccgttaaaaattgatgcggaaccaagtcgc
cgtgagcgtaaaaaaatccaacaatggtattaccatgcggataacttagaacacaaaacc
aaattgcttgctcgtttaatttctacgatggaaatggaaaaagcgattgtattcgttcgc
cgtcgtgaagatgtgcgtgagttaagcgatacgttacgtaaacgtggcttacgttcgact
tatttagaaggcgatatggcacaaactcagcgtaaccaagcgatcgcccgtttgaaagac
ggtgtagtgaatgtattggtagcgacggatgttgccgctcgtggtattgatattgatgat
gtcgattatgtgattaacttcgacttaccgtacagtgcagatacctatttgcaccgtatc
ggtcgtaccgctcgtgccggtaaaaaaggatcggcgatttcgttggttgaagcgcatgat
tacaaactgttaggcaaaatcaaacgctataccgaagagttgttaaaagcgagggtgatt
gaaggtttagaacctcgtaccaaagcgccgaaagacggtgagttgaatactacgaccaaa
aaagaaaaagcacgtattaaaaaacgtaaagaagcgaagaaagaagcggcaaaagccaaa
gtaaaagtgcgtcataaagacaccaaaaatattggtaaacgtcgtaaaccgacttcagaa
gcggcaaaatctgcgtaa
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