Aequorivita ciconiae: EI546_00500
Help
Entry
EI546_00500 CDS
T05794
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aev
Aequorivita ciconiae
Pathway
aev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI546_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aev03021
]
EI546_00500
03019 Messenger RNA biogenesis [BR:
aev03019
]
EI546_00500
Transcription machinery [BR:
aev03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EI546_00500
Messenger RNA biogenesis [BR:
aev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EI546_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
QAA80307
UniProt:
A0A451FSD1
LinkDB
All DBs
Position
complement(102143..103987)
Genome browser
AA seq
614 aa
AA seq
DB search
MFDISELKNKKLPELQDIAKELNVPKYRTQKKLDLVYQILDYQAANPKAVKAVLSAESSE
TEDTKQVNKTEAPKEVSEKKDSNPRSQQVDDRNKGSQASKPHSQKNQPQKSHSQKSQHSS
TTGGSDKKQGEDKRTTPDKSDRSDKTDRSDRMDRTDKMDKSDKTDRSDRSDRPDRSSSDK
KQQHQQKQSSGDQDSRQKHQRSDSHNTDNRQKHQSNKQKDGNVQDNKNGNKDSRNRYREP
DYEFDGIIESEGVLDIMQDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKSGDTVLGEV
RPPKEGEKYFPLIKVNKINGLSPNVVRDRVSFEHLTPLFPQEKFNIADKQSTISTRIIDL
FAPIGKGQRGMIVSQPKTGKTMLLKDIANAIAANHPEVYQIILLIDERPEEVTDMQRNVR
GEVVASTFDKEATEHVRVANLVLDKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKI
LSGGVDANALHKPKRFFGAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQ
LDRKISNRRIFPAIDLTSSSTRRDDLLLDENTIQRMWVMRKYLADMNPVEAMEFINDRIK
KTRNNEEFLISMNG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacatttcagaattaaaaaacaaaaagcttcccgaacttcaggatatagcgaaa
gaactcaatgtgccaaaataccgcacacaaaaaaagctggatctagtatatcaaattctt
gattaccaagctgctaatccaaaagcagtaaaagctgttctgagcgctgaatcttcagaa
actgaagatacaaaacaagtaaataagactgaagcaccaaaagaagtcagtgagaaaaag
gattctaatcctcgttcgcagcaggtcgacgaccgcaataaaggttcacaagcttcaaaa
ccacattctcagaagaaccaacctcagaaatcccattctcaaaaatcccaacattcgagc
accactggcggttccgacaagaagcaaggtgaggataagcgtacaacaccagataaatcg
gatagatctgataaaactgataggtcggatagaatggacagaacagataaaatggataaa
tctgataaaacagatagatcggacagaagcgatagacccgatagatctagtagtgataaa
aagcaacaacatcagcaaaaacaaagttctggcgaccaagacagccgtcaaaaacaccaa
cgatctgatagccataatacggataacagacaaaaacaccaatctaataaacaaaaagat
ggcaacgtacaggataacaagaatggaaacaaggattccagaaaccgttatcgcgagccg
gattatgaatttgatggtattatcgaaagcgaaggtgtcctagatattatgcaggatggc
tacggatttttaagatccagtgattataattacttatcctcacctgacgatatttacgtt
tcccaatcacaaatcagattattcggattaaaatccggggatacagtactgggagaagtt
cgacctcccaaggaaggagaaaagtatttccctcttattaaggtgaacaaaataaatggt
ttaagtcctaatgttgttcgagatagagtttcattcgagcacttaacacctctttttcca
caagaaaagttcaacattgccgataaacaaagcactatttccacacgaattatagatctt
tttgcacctattggaaaaggtcagagaggaatgatagtatctcaacccaaaacgggaaaa
acgatgctgctgaaagatattgccaacgcaattgctgctaatcaccctgaggtttatcaa
atcatattacttatcgatgaacggcctgaagaggttacggatatgcagcgaaacgtacgt
ggcgaagttgttgcttctacctttgacaaggaagctacggagcacgttcgggttgcaaac
ctagtactggacaaagccaaaagattggtggaatgtggacatgacgtcgtaattctttta
gattccattacacgtttggccagagcctacaataccgtacaacctgccagtggtaagatt
ttaagtggtggtgttgatgccaatgcccttcacaaaccaaaacgtttctttggagctgcc
cgaaatattgaaaatggcggctctttaagtattattgcaacggctctgactgaaacaggc
tcaaagatggacgaagtaatatttgaggaatttaagggaaccggtaatatggaactacag
ttggacagaaagatttccaaccgaagaattttcccagctattgaccttacttcatccagt
acacgtcgcgacgacttgttacttgatgaaaacaccattcaaagaatgtgggtgatgaga
aaatatctagctgatatgaaccctgtggaagctatggaatttattaatgacaggatcaag
aaaaccagaaacaacgaagaatttctcatatcgatgaacggataa
DBGET
integrated database retrieval system