Aequorivita ciconiae: EI546_01845
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Entry
EI546_01845 CDS
T05794
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aev
Aequorivita ciconiae
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aev03021
]
EI546_01845 (rapA)
Transcription machinery [BR:
aev03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EI546_01845 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Tudor_RapA
Motif
Other DBs
NCBI-ProteinID:
QAA83144
UniProt:
A0A410G784
LinkDB
All DBs
Position
400718..403552
Genome browser
AA seq
944 aa
AA seq
DB search
MKNTNGFYPNQRYTSKGEPELGIGILTESNNRQVKIYFPLSNETRMYAMESAPLRRVVFK
AGDTIEDVNKQAMLIERVGMESGLYTYYGNDKKISEADLGDVSINYGVDDRFFMGDVDTP
QAFALRRETLQHEYERKISPVHGFVGGRIDLIPHQLYIAHEVSSRYAPRVLLSDQVGLGK
TIEACLIIQRLLLSGRISRVLILVPDSLIHQWFVELLRKFNMWFHIFDEARSASLDDSSP
DGNPFLANQLILCSTEFLAASEKRSSQALTAGWDMLVVDEAHHLEWSGDKVSPEYAVVEL
LSKVAKGLLLLTATPEQLGEESHFARLRLLDPNRYTSYEDFINETSDHKTIANIVEKLHL
GKNLNSKDIKILESIFMKERIQAVIKGAEMAKDNLIEDLLDQHGPGRVLFRNTRSAMTDF
PKRKAHLIPLKAKKDPSLWLQRLTDEFARDMNLEETSEEQEFWFKEDPRVQWLLDTLKKI
YQAKALLICKSKEKVLALEKVLTQRANLKVGVFHEDLTIVQRDRNAAWFAESDGAQILLC
SEIGSEGRNFQFAHHLILFDLPLHPELLEQRLGRLDRIGQTEDIHIHIPYLLQSPQHKLV
RWFHEGLNAFEKNIEGGYKVYQLFGERLQDVFNSPSATDPDPQLEALIAETSIFQKELQK
SLAEDRDRLLEMNSFRPAIAEKIVEQIQKEDRDDTLETYFTKVFEYFNVEMEDLAARTYF
LHPASEITEIFPSIPPKGISVTFSRNYALRREEVSFLTWDHPLTTECIDMMLSSGTGSAS
FGILHNAKTPGLLLEILFVLETSRQQGVYIDRFLPNTPLRIVVDLHGNEVTDSYSVETFD
KNLTPGPIEPLLDNETLIETILPKMIAAATKVAAEQSSKEIAKGLQTMNLTLNHEIDRLK
TLQTKNKNIRPEEIESALEEQTTLASLIKNARVRMDAMQVIIIE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacaaatggtttttatcccaatcagcgctacaccagcaaaggtgaacccgaa
ctggggattggcattctaacagaatccaacaaccgacaggtaaaaatatatttcccctta
tccaatgaaactaggatgtatgcgatggaaagtgcgcccttgcgtcgggttgtttttaaa
gcaggcgataccatagaagatgtaaacaagcaagcaatgctgattgagagggtagggatg
gagagtggtttatatacgtattatgggaacgacaaaaagatctcggaagcagatcttggc
gatgtttcgataaattatggcgtggacgacaggttctttatgggggatgtggatactccg
caagcttttgctttgcgtagggaaaccctgcaacatgaatacgaaagaaaaatttctcct
gtacatggatttgtcgggggaaggatagatcttattccacaccaactctatattgcccac
gaagtgagttcccgctatgcgccgcgtgttctgctttcagatcaggtgggtctgggaaaa
actattgaagcctgccttattatccaacgtttattattgagtggccgaatttcgagagtg
cttatcctagttccggactctttgatacatcaatggtttgtggagttattgcgaaaattc
aatatgtggttccatatttttgacgaagctcggagtgcttccctagatgacagttctccg
gacggaaacccctttcttgccaatcaattgattctttgcagcacagagtttttggcagct
tccgaaaaacgtagcagccaagccctaaccgccggttgggatatgttggttgtcgatgaa
gcccatcacctggaatggtctggggacaaagtgagtccggagtatgccgttgtggaactt
ttgagtaaagtggcgaaaggattactgcttctcaccgctacgccggaacaattaggagaa
gaaagccattttgcgcgtctgcggttattggatccaaacagatatacgagctatgaggat
tttataaacgaaacttccgaccataaaaccattgccaatatcgttgagaaattgcactta
ggaaaaaatctgaattccaaagacataaaaatcctagagtcgatttttatgaaagaacgg
attcaagccgtgattaaaggagccgaaatggcaaaggacaacctgattgaagatctactc
gatcaacatggccctggacgtgttttattccgaaacacccgatctgccatgaccgatttt
ccaaagcgaaaggcacatctcattcctttaaaagctaagaaagatccttcactttggctt
cagcgattgacggatgagtttgcccgggatatgaatttagaggaaacttctgaagaacag
gagttttggtttaaggaagaccctcgcgttcaatggcttttagatacgttgaagaaaata
tatcaggcgaaagcattgctcatctgcaagagtaaagaaaaagttctggcattggaaaaa
gtattgacccagcgtgccaatctaaaagtaggcgtttttcacgaagacctcaccattgta
caacgggacagaaatgcagcttggttcgcagaatcggatggcgctcaaatcctcctttgt
tctgagatcggaagtgagggtcgcaattttcaattcgcccatcaccttatcttattcgac
ttaccgctgcatcccgaattgttggagcaacgcttaggccgcttggacaggattggccag
acagaagatatacacattcatattccatatcttctccaaagcccacagcataaactggtg
cggtggtttcacgaaggcttgaatgcctttgaaaaaaatattgagggcggctataaagtt
taccaactatttggagaacgcctgcaagatgttttcaattctccttccgccacagatcct
gatccgcaactggaagccttgattgccgaaacctcaatttttcaaaaagaacttcaaaaa
agccttgctgaagaccgtgatagattactggagatgaattcctttcgacctgcaatagct
gaaaaaatagtcgaacaaattcagaaagaagatcgggatgatacccttgaaacctatttc
accaaagtctttgaatattttaatgtggaaatggaagaccttgccgcccgaacctacttt
ttgcatcctgcttcagaaatcaccgagatttttccctccattccgcctaaaggtataagt
gttactttcagtagaaattacgcgcttaggagagaagaggttagtttcctaacttgggat
catccgcttacaacggagtgcatagacatgatgctaagctccggcaccggaagcgccagt
tttgggatcctacataacgccaaaaccccgggccttttacttgagattctttttgttctt
gaaacatcgagacaacaaggggtatatatagaccgttttcttcccaatactcccttgcga
attgttgtggatctccacggcaacgaagtaacagatagctattctgttgaaacattcgac
aaaaatttgactcccggcccaatagagcctttgctggataatgaaaccttgatagaaact
atcctgcccaaaatgattgccgcagccacaaaagtcgctgcagaacagagttcaaaagaa
attgcaaagggactgcaaaccatgaacctcaccctgaatcatgaaatagataggctaaaa
acccttcaaacaaaaaataagaacatcaggcccgaagaaattgaaagtgcccttgaagaa
cagacaacattggcatcacttattaaaaatgccagagtacggatggatgccatgcaggtt
ataataatagagtag
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