Aequorivita ciconiae: EI546_03220
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Entry
EI546_03220 CDS
T05794
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aev
Aequorivita ciconiae
Pathway
aev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI546_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aev03019
]
EI546_03220
03400 DNA repair and recombination proteins [BR:
aev03400
]
EI546_03220
Enzymes [BR:
aev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI546_03220
Messenger RNA biogenesis [BR:
aev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI546_03220
DNA repair and recombination proteins [BR:
aev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI546_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QAA80799
UniProt:
A0A410G0M3
LinkDB
All DBs
Position
720698..722596
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AA seq
632 aa
AA seq
DB search
MKPIRDILLEYWGYPSFKPMQERIITSVLNGKDTVALLPTGGGKSLCFQVPAMTMEGICI
VISPLVALMGDQVNALKERGIKALKITGGISFDELNTSLDNALYGNYKFLYLSPERLQQE
IVQNYIRQMKVNLIAVDEAHCISQWGNDFRPAYKNISLLRKIHPLVPIIALTATATLEVL
EDTIAELNLELPAIFKNSFVRENLSYQVYKAEDKLYRAEKLLKNNSGSAIVYVRSRKSSV
EVSDQLNTLGISATHYHGGLSTKEKAEKLKSWRGGQVSTMVATNAFGMGIDHPNVRFVVH
LQIPESTESYFQESGRAGRDGEYATAVLLFNEYDKIYVKKQFIESLPNTNDLKKIYRHLN
NYFQIPYGEGEFTKHNFSFSEFCRMYGLNSILAYNALNSFDRLGIIQLSQEFGRKSTMQF
LVSSEKLLYYFEKDMATSIIGKTILRIYGGIFEMPTSINLDLIASKTGQSIERVISALKK
MERDHVLEMMLQTTDALLTFLLPREDDKTINVVSREVEALNRKKVLQVNSMLRYIENNDI
CRSIQLVSYFGETTATKCGICSVCIGGTSKLSRNETREIANHILALLEGRDLSSREISER
LNFAEEHTLKVIRLLMDAERIGMTPKNQFYLI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacctattagagacatcctgcttgaatattggggatatccttctttcaagcctatg
caggaaagaataataacctccgttctgaacggtaaggacaccgtggccctacttcccacg
ggtggtggcaagtctctgtgtttccaagttccggcaatgactatggaaggcatttgcatc
gtaatttcaccccttgtagcattaatgggagatcaggttaatgctctaaaggaaagggga
attaaggctttaaaaattaccggaggaatttcctttgacgaattaaatactagcttggac
aacgccctttatggcaattataagttcctttacctgtcacctgaaaggctgcagcaggaa
atagtccaaaattacatacggcagatgaaagtcaatcttattgctgtggacgaagcccac
tgcatttcgcaatggggaaatgattttaggccggcatataaaaacatttcactattaaga
aaaatccatcccttggtgcccattattgcactcacggccacggcaactttagaggtttta
gaggacaccattgcagaactaaacctggaacttccagctattttcaaaaactcttttgtt
agagaaaatctctcctatcaggtttataaggcggaggacaaattgtatcgggcggaaaaa
cttttgaaaaacaattccggatcggccattgtttacgtaagaagtaggaaaagttctgta
gaagtaagtgaccagctgaatactttgggaatttctgcaacacattatcacggcggatta
tcgaccaaggaaaaagccgaaaaactgaaatcgtggcgtggcggccaagtttccacaatg
gtggcaacaaatgcctttggaatgggcatagaccatcccaatgtacggtttgtagtccat
ctgcaaataccagaaagcacggaaagctattttcaagagtcggggcgcgcaggtcgtgac
ggtgagtatgccaccgcagttttactattcaatgaatatgataaaatatatgtaaagaag
cagtttatagaatccttaccaaacaccaatgatcttaaaaagatataccgtcatctcaac
aattattttcaaataccttatggtgaaggggaattcaccaagcacaattttagcttttct
gaattctgtaggatgtatggccttaattctattttagcctataatgccttaaacagtttt
gaccgtttgggaattattcagttatcccaggaatttgggagaaaatcgaccatgcaattt
ctagtttcctctgaaaaattattatattattttgaaaaagatatggcaacctcaataatt
ggaaagacaattctccgaatatatgggggaatatttgagatgccaacctcgataaatctg
gatttgattgcttcaaaaaccggacaatctattgaaagggttatttccgcccttaaaaag
atggaaagggatcacgttttggaaatgatgctccagaccactgatgcactcctaactttt
ctattgcctcgggaagacgataaaacaattaacgtagtgtcacgcgaggtggaagcttta
aaccgaaaaaaagtccttcaggtgaattccatgttgcggtacattgagaacaatgatatt
tgtcgaagcatacaattggtctcttatttcggtgaaactacggcaaccaaatgtgggata
tgctcagtatgcattggcggcacttccaagttgtcaagaaacgaaaccagagaaattgca
aatcatatactagcattattggaaggccgcgatttatcatcaagggaaatctcagaaaga
cttaattttgccgaagagcataccctaaaagtaattcgattgttgatggatgccgaaaga
attggtatgactcctaagaatcaattttatttaatttaa
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