Aequorivita ciconiae: EI546_06820
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Entry
EI546_06820 CDS
T05794
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aev
Aequorivita ciconiae
Pathway
aev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI546_06820 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aev03019
]
EI546_06820 (recQ)
03400 DNA repair and recombination proteins [BR:
aev03400
]
EI546_06820 (recQ)
Enzymes [BR:
aev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI546_06820 (recQ)
Messenger RNA biogenesis [BR:
aev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI546_06820 (recQ)
DNA repair and recombination proteins [BR:
aev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI546_06820 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
QAA81458
UniProt:
A0A410G2F0
LinkDB
All DBs
Position
complement(1538153..1540345)
Genome browser
AA seq
730 aa
AA seq
DB search
MAELDLYASLKKHFGFSRFKGLQEEVIKSILAGNNTFVVMPTGGGKSLCYQLPALMQEGT
SIVVSPLIALMKNQVDALRALSSEEGVAHVLNSSLNKTEVKRVKSDIASGITKLLYVAPE
SLTKEEYVEFLNNQKISFLAIDEAHCISEWGHDFRPEYRNLKSIIKRIGDDIPIIGLTAT
ATPKVQEDILKNLGMPDANTFKASFNRPNLYYEIRPKTKNVDSDIIRFVKQNEGKSGIIY
CLSRKRVEELAQALQVNGIKAVPYHAGLDSKTRVKHQDMFLMEDVDVVVATIAFGMGIDK
PDVRFVIHNDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEI
GHALLQEVVAYAETSISRRKFILHYFGEEFDNATGEGGMMDDNMRFPKKKIEAQSEAKKL
LEVVQKTNQQYKSKEIVNVMVGKVNALIKSHRTDAQAFFGSGAGHEASYWTALLRQLLVA
RYLKKDIETYGVIHLTEMGRKFIESPSSFMMTEDHSFKDANDDIIVSASQGVEKADENLF
KLLKAELKKVAHKLELPPFVIFQEPSLEDMSLKYPITMEELANVHGVGEGKAKKYGKPFL
KLIQDYVEENDIMRPEDFVVKSTGTNSSLKLYIIQNVDRKLSLPDIANAKGIEMPEFIKE
MEAIVYSGTKLNIDYWIDEILDEDQQEEIHDYFLEAKTDEIEVALDEFDGDYEEEELRLY
RIKFISEIGN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaattagatctgtatgcatccttaaaaaaacatttcggttttagtcgatttaaa
ggattgcaagaagaagtaataaagagtattctggccggaaataacacttttgttgtaatg
ccaacaggaggtgggaaatccctttgttatcagctccccgctctaatgcaagaaggaact
tctatcgttgtctccccattaattgctcttatgaaaaatcaggtagatgcgttgcgcgct
ctttcttcggaagagggtgtggcgcatgtgctcaactcttccttaaataaaaccgaggtt
aaacgggttaaaagcgacatcgccagtggaatcaccaaattactgtatgtggctcccgaa
tccttgactaaggaagaatatgtggagtttttaaacaatcaaaaaatttcctttttggca
atcgatgaggcacattgcataagtgaatggggccacgatttccgacctgaatatcgaaac
ctgaaaagcataatcaagcgaataggtgatgatattcctattatcggtcttaccgcaact
gctactcccaaggttcaggaagatattctgaaaaacctcggaatgccagatgccaatact
tttaaagcgtcttttaatcgtcccaatctttattatgagatacgtccgaaaaccaaaaat
gttgattcggatataatccgttttgtaaaacagaatgaaggcaagagcggtattatctat
tgcttgagccggaagagagttgaagaacttgcccaggcgctccaagttaatggtataaag
gcggttccatatcatgccggactcgatagcaagaccagagtgaagcaccaggatatgttt
ttaatggaagatgtggatgtagtagtggctacgattgctttcggaatgggtattgacaag
cccgatgtgcgatttgtgatccataatgatattccaaaatctatagagagttattatcag
gaaaccggtcgtgccggtcgagatggtggagagggtcactgccttgctttctacagctat
aaggatatagagaagttggagaagtttatgagcggaaaacctgttgccgaacaggaaata
ggtcacgcactcttgcaggaagttgtagcttatgctgaaacttccatttcgcgacggaaa
tttattctccattattttggggaagaatttgacaatgctaccggtgaaggaggaatgatg
gatgataatatgcgctttccgaagaaaaaaattgaggcacagagcgaggccaagaaacta
ctcgaggtagtgcaaaaaaccaaccagcaatataaatccaaggaaatagtgaatgtgatg
gtgggaaaggtaaatgccctaataaaatcgcatcgcaccgatgctcaagcctttttcggc
tcaggagctggacatgaggcgtcctactggaccgcactcctgcgacagttattggtggca
aggtatctaaaaaaggatattgaaacctatggggtcattcatttaaccgaaatgggaaga
aaatttatcgaatctccttcctcatttatgatgaccgaagatcattcgtttaaagatgcc
aatgacgacattattgtttccgcgtcgcagggagtggaaaaagcagatgaaaacctcttt
aagttactaaaagcagagcttaaaaaagttgcccacaagctggaattgcctccttttgtt
atttttcaggaaccttcgttggaagatatgtctctgaaatacccaataactatggaggag
cttgcaaacgttcatggagtaggcgaggggaaagctaaaaaatatggaaaacccttcttg
aaacttatccaggattatgtagaggaaaatgatattatgcgtcctgaggatttcgtggta
aaatctacgggaaccaatagttctttaaaactatatattatccaaaacgtggaccggaaa
ctttccttaccagatatcgccaatgccaagggaattgaaatgcctgagtttataaaggaa
atggaggctattgtttacagtggaacaaaattgaatatagattattggatagacgagatt
ttggatgaggaccagcaggaagaaatacacgattattttttggaagccaaaacggatgaa
attgaagtggcccttgatgaatttgatggtgattatgaggaggaggagctacgtctctat
cgtattaagtttataagcgagatcggaaattaa
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