Aequorivita ciconiae: EI546_10115
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Entry
EI546_10115 CDS
T05794
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aev
Aequorivita ciconiae
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aev03032
]
EI546_10115
03400 DNA repair and recombination proteins [BR:
aev03400
]
EI546_10115
Enzymes [BR:
aev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EI546_10115
DNA replication proteins [BR:
aev03032
]
Prokaryotic type
DNA Topoisomerases
EI546_10115
DNA repair and recombination proteins [BR:
aev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EI546_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QAA82054
UniProt:
A0A410G451
LinkDB
All DBs
Position
complement(2315625..2316614)
Genome browser
AA seq
329 aa
AA seq
DB search
MYYRKKRGKGFTYQDEKGKTIKDEETREWIKSLVIPPAWTEVEISENRKSDLLVTGRDDK
DRKQYIYHPNYTKRQNAKKFDRIINFADQLEHMRRVTGQHLRKRKLNREKVLATMLRLME
SAFFRPGSDTYSKENESYGLTTMRHKHLTIDGSEIIFNYVGKSGQEQEKHIDDKKLAKII
QEIDDMPGYEIFKYLDEDNNIVKVKSDDLNAYIREIMGEEFSAKDFRTWAGTMIAAIALD
ELGVVDKKDQKSMDKNIKEAVNRVSERLGNTPSVARGSYIDPRIIDDYMHGRTLKYFEKE
INQLLKKAENLSKAEIGVLCMLRNRLKSK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtactatcgaaaaaagagaggcaaaggtttcacttatcaagatgaaaaaggaaaaaca
attaaagatgaagaaacacgggaatggattaaatctttggttattccgccagcttggacg
gaagtggagataagcgagaatcgcaaatccgatttattggttaccggtcgcgatgataaa
gacagaaaacaatacatctatcatcctaattacacaaaaaggcagaacgccaagaagttt
gatcgcataataaactttgccgaccagttggaacatatgcgccgagtaaccggacaacac
ttgcgaaagcgtaaattaaatagggaaaaggtccttgccaccatgctccggttaatggaa
tcggcattcttccggccgggaagtgatacttattccaaagaaaatgaatcctatggctta
actacgatgcgccataaacatcttaccatagacggaagtgaaattattttcaattatgtg
ggcaaatcggggcaggaacaggaaaaacatatagatgacaaaaaattagctaagattatc
caagaaattgacgatatgcctggctatgagatttttaaatatttggacgaggataataat
attgtcaaagtaaaaagtgacgatttaaatgcctatatccgcgaaataatgggtgaggaa
ttctccgccaaggattttagaacctgggcgggaaccatgatcgcagccatcgctcttgac
gaactgggagtggtggacaaaaaggaccaaaaatcaatggacaagaatattaaagaggcc
gtgaaccgtgtttcggaaagattgggaaataccccttcggttgcgagaggttcctacatt
gatccccgaattatcgatgattatatgcacggacgtaccctcaaatattttgaaaaggaa
attaaccaattacttaaaaaagcagaaaatctatcgaaggcagaaataggggttttgtgt
atgctcagaaataggctgaaaagtaaatga
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