Aequorivita ciconiae: EI546_11675
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Entry
EI546_11675 CDS
T05794
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aev
Aequorivita ciconiae
Pathway
aev03410
Base excision repair
aev03430
Mismatch repair
aev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EI546_11675 (recJ)
03430 Mismatch repair
EI546_11675 (recJ)
03440 Homologous recombination
EI546_11675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aev03400
]
EI546_11675 (recJ)
DNA repair and recombination proteins [BR:
aev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EI546_11675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EI546_11675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EI546_11675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Stealth_CR4
Motif
Other DBs
NCBI-ProteinID:
QAA82334
UniProt:
A0A410G4Y2
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All DBs
Position
2647205..2648896
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AA seq
563 aa
AA seq
DB search
MRWTLKPKPNPGKVDSLSKLLGVHPIIATLLVQRGIETYEEAKAFFRPSLSALHDPFLMK
DMEKAVERIERAVANGENIMVYGDYDVDGTTSVALMSSFLKSYYPNVSTYIPDRYDEGYG
ISYKGIDFADDNDFTLIIALDCGIKAIDKVAYASEKNIDFIICDHHLPGKEIPKAVAVLD
PKRLDCVYPYKELCGCGVGFKLIQALSQNLGLEIEHLVPYLDLVATAIGADIVPITGENR
ILAYYGLRVINTNPRTGFQAIIKQIKKQTLTITDVVFIIAPRINAAGRMKHGIHAVDLLT
ETNMEKAEVFASEIEKFNADRRETDKRITQEALAQIIQNKEEERRTTVVYHESWHKGVIG
IVASRLTETYYRPTLVFTRSGERLAASARSVKDFDVYNALESCAQYIEQFGGHKYAAGLT
LLEKDFEDFKMEFERVVSETIEPRLLHPEIHIDAEIDLEDITPKFYRIIKQFAPFGPGNM
TPTFMTQNLRDVGYGKCVGEDQSHLRLVVKQDSSTQFIGIGFGMANKQDIACTGKPFKAV
YSIDENEWQGNLSLQLRLKDIRE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggactcttaaaccaaaacctaatcctggaaaagtagattccctttcaaaattg
ttgggtgtacatcctattattgcaaccttattggtccagcgtggcattgaaacttatgag
gaagccaaagcattttttaggccgagtttaagcgcactgcatgatccttttcttatgaag
gatatggaaaaggccgtagaacgcattgaaagggctgtagccaatggcgaaaatataatg
gtttatggcgattacgatgtggatggaacaacgagcgtggcgctaatgtcttcttttctg
aaaagttattatccaaatgtttcaacctatattccggaccgatatgacgaaggttatgga
atttcatataaaggaatcgattttgccgatgataatgatttcaccttaataatcgcactg
gattgtgggattaaggccatcgataaggtagcttatgcttccgaaaaaaacatcgacttc
attatttgcgaccatcatttgcctggaaaggagattccaaaagcggttgctgttttagat
ccaaaacgcttggattgcgtttacccatataaagaactgtgtggatgtggagttggtttt
aaattaatacaagccttgtctcaaaatctcggattggagattgagcaccttgtcccgtat
ttggatttggtagcgactgctattggtgcagatattgtccccatcacaggggaaaataga
attcttgcctattatggacttcgggttataaacaccaatccccgcacgggttttcaggct
attataaagcagattaagaaacaaactcttacaatcactgatgttgtttttatcatcgca
ccccggattaacgcggcgggaagaatgaaacacggaattcacgctgtggatctgctcacg
gaaacaaatatggagaaagcagaggtgtttgccagtgaaattgaaaaattcaacgccgat
cggagggagacggataagagaatcacccaagaagctcttgctcaaataattcagaataag
gaggaggaaagaaggaccaccgtggtttatcacgagagttggcataagggagttattgga
atagtggcatcccgattgacggaaacctattatcgcccaaccttggtttttacccgtagt
ggtgagcgattggcagcatcagcacgctcggttaaagatttcgatgtgtacaatgccttg
gaaagctgcgcacagtatattgaacaatttggaggacataagtatgcggccggcttgaca
ttgttggaaaaggattttgaggattttaagatggaatttgagcgggtggtttcagaaaca
attgagccacgcttgctacatcccgaaatacatattgatgcggagatagatttggaggat
attaccccgaaattctacaggattataaaacaattcgctccttttggtcccggtaatatg
acccctacttttatgacccaaaatttgagagatgtgggatatggaaaatgcgtgggggag
gaccagtcacatttacgactggtagtaaaacaagatagttctacccaatttattggtatt
ggatttggaatggcgaataaacaggatatagcatgcacagggaagccttttaaagccgtt
tatagtattgatgagaatgaatggcagggaaatttgagtttgcaactaaggttaaaggat
attcgcgagtga
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