Aequorivita ciconiae: EI546_14475
Help
Entry
EI546_14475 CDS
T05794
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aev
Aequorivita ciconiae
Pathway
aev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI546_14475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aev03019
]
EI546_14475
03016 Transfer RNA biogenesis [BR:
aev03016
]
EI546_14475
Enzymes [BR:
aev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EI546_14475
Messenger RNA biogenesis [BR:
aev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EI546_14475
Transfer RNA biogenesis [BR:
aev03016
]
Prokaryotic type
tRNA degradation factors
EI546_14475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
DUF7832
Motif
Other DBs
NCBI-ProteinID:
QAA82848
UniProt:
A0A410G6C6
LinkDB
All DBs
Position
complement(3293434..3295686)
Genome browser
AA seq
750 aa
AA seq
DB search
MIPKVFKEVIDLGDGRQITLETGKLAKQAHGSVVVQSGKCMLLCTVVSNYQQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRINGEFIINPSRAQLEESDIDMVI
GASMDSVMMVEGEMKEISEEEMVDAIKFAHDHIKKQCEAQMRLADAVGRKKVREYEPERE
DEELKKKIHEMAYDKVYAIAHSASAKHERTDAFEAIKEEIKGTFSEEELAENGDLISKYY
YSAEKDAVRDLTLNEGLRLDGRKTDEIRPIWCEIDYLPSVHGSAIFTRGETQALATVTLG
TSREANQIDMPSYEGEETFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMIPS
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQLKKPVSGIAMGLISDSESGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAAAGRLHILDIL
VDTIAEPKADVKPYAPKMITVRIPNEFIGALIGPGGKVIQQLQKDTKTTIVINEDPVTEE
GIVEILGTGQEGIDAVMAKIDSLTFKPEVNSVYEVRVIKMLDFGAVVEFLDAPGNEVLLH
ISELAWDRTENVSDVVHMGDVFDVKYFGIDPRTRKEKVSKKALMQKPEGYKERAPREDNR
SGGRDNNRGGRDNRDNRGRDNNRDRDRKRD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaaagtatttaaagaggtcattgacctaggtgatggaagacaaatcaccctt
gaaaccggaaaactggctaaacaggcccatggttctgttgtggtacaatctggaaaatgt
atgctgctttgtacggtagtttccaactaccaacaaagtgacgtggatttcctgccctta
acggtagattatcgcgaaaaatttgcagcggctggtcgctatccaggtggtttcttcaaa
agagaagcgagaccaagcgacggtgaggtattaactatgcgtttagtggatcgtgttctg
cgcccacttttcccaaaggattatcatgctgaaacacaagtgatgattcagttgatgagc
cacgacgaagacgttatgccagatgctatggcaggtttagcagcttctgcagcgattcaa
ctttcagattttccttttgaatgtgctatttctgaagcccgtgtgggaagaatcaatggc
gagtttatcatcaacccgtcaagagcacaattggaagaatcggacatcgatatggtaatc
ggcgcttccatggattccgtgatgatggtggaaggagaaatgaaagaaatttctgaagaa
gaaatggttgacgccattaaatttgcccacgaccatatcaaaaaacagtgtgaggcacag
atgagattggccgatgctgttggaagaaaaaaagtacgtgaatacgagcctgaacgcgaa
gatgaggaattgaaaaagaaaattcacgagatggcatacgataaagtttatgccattgct
cattccgcatcggcaaaacacgaaagaacagatgcgtttgaagctattaaagaagaaata
aaaggaactttctctgaagaggaattagctgaaaatggcgacctaatttcaaagtattat
tactcggcagaaaaagacgccgttcgtgatcttaccttaaatgaaggtttgcgattggat
ggaagaaaaacggatgaaattcgcccaatatggtgtgaaattgattatttaccttctgtt
cacggatctgcaatctttacacgcggggaaactcaagcattggccacggtaactttggga
acttctcgtgaagcgaaccaaattgatatgccatcttatgaaggtgaggaaactttttac
cttcattacaacttccctcctttttccactggagaagctcgcccaattcgcggaacttca
cgtagagaagtaggacacggaaacttggctcaaagagcacttaaaggaatgataccttca
gattgtccatataccgttcgtgttgtttcagaagtattggaatctaacggctcttcttct
atggcaacagtttgcgcaggaacaatggcgcttatggatgctggcgttcaattgaaaaaa
ccggtttctggaattgctatgggattgatttccgatagtgaatctggaaaatacgccgta
ctttctgacatattaggtgatgaagatcacttgggagatatggactttaaagtaaccgga
accgcagacggcattaccgcctgccaaatggatattaaggtaaaaggactttcttacgaa
attttggtaaatgctttaaaacaagctgctgccggaagacttcacattctcgatattttg
gttgacacaattgctgaaccaaaagcagatgtgaaaccttacgctccaaaaatgattacc
gttagaattccaaacgaatttattggtgccttaattggaccgggtggaaaagttatccaa
caacttcaaaaggatacaaaaactactattgtcatcaacgaagatcccgttacagaagag
ggcatcgtagaaatacttggaacaggtcaagaaggaattgatgctgtaatggcgaaaatc
gattctcttacttttaaacctgaagtgaatagtgtctatgaagtgagagttataaaaatg
ctcgatttcggagctgttgttgaatttttggatgctccaggaaatgaagtattactccat
atttctgaattggcttgggaccgaaccgaaaacgtaagtgatgttgttcatatgggcgac
gtatttgatgtaaagtattttggaattgatcctagaacccgtaaggagaaagtatccaag
aaagctcttatgcaaaagcctgagggctataaagaacgtgcgccacgtgaggataaccga
agtggtggacgggacaataaccgaggaggacgcgacaaccgtgataatcgtggccgcgac
aacaaccgcgatagagatagaaagagagattaa
DBGET
integrated database retrieval system
