Actinidia eriantha (wild kiwifruit): 130750153
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Entry
130750153 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130750153
KO
K26109
nuclear exosome regulator NRDE2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130750153
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130750153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
HAT_PRP39_C
TPR_19
Motif
Other DBs
NCBI-GeneID:
130750153
NCBI-ProteinID:
XP_057459569
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All DBs
Position
16:26207569..26225493
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AA seq
1185 aa
AA seq
DB search
MKLKPRSSGINETFAMETPMEAAAEEPAATAPASLFPVALRPASDGDAITNTHPRQWLCN
QTFTTDLSVIEDAVKHTNLVVKSQSEEEEEGGIKIEDKYTRLQSHALVESSSDGERGRKK
NKKKEKEKEKDKKRKISYSSSSSRSAYNFDATSRKPNVSSWDSSSSDAAKSTAKKYYFDS
RGDRDNLAFGCIYRMDVARYKLCKSMKSYEINYEWSRKNLFFEGDSDIDALNNRLKSGGR
YWSAKYSAVERHKNLKRIRIIVPIQSSVTTPGDFIPLLDDQTSGKGVDGGLPSGASVVEE
SWEDEVLRRTMEFNKQTREHPHDEKVWLAFSDFQDKVASKQPQKGARLQTLEKKISILEK
ATELNPDNEELLLGLLNAYQSRDGTDVFIGRWEKVLMQHPGSYKLWKEFLRAVQGDFSRF
KVSEMRKMFANAIRALSSACSRQHRQAHQTANALDLDAAIVQQEFGLVDIFLSLCRFEWQ
AGYQELATALFQAEIEYSLFCPPLLLTEQSKHRLFEHFWNSSGARVGEDGAPGWATWLEK
EEEERKKIISEESSNENEEGGWTGWSQPLSETKDSSANPESIMDDVALEELDEEFETIAV
EQKDDTEALLKMLGIDADTDPNSEVKDTITWTRWSEEELSRDSDQWMPIRAKSNGISHGN
ATPDREGNEQLLSVILFEDVSEYLFSISSKEARLFLVFQFIDFYGGRVSKWTCTNSSTWV
ENTLSFVKLPDSILENLRRVHGVITTTESSPSNFSFEFLLGSSNDISMRTDMMTFLRNAT
LLCLTAFPHDYILEEAVLVAEELLNTKMDSCSCSVTPCRALAKSLVKSNRQDVLLCGVYA
RREAAYGNVDHARKIFDMALASIEGLPSDLRSTASLLYFWYAEVEISNSSSSGSEPSLRA
VHILCCFGSGVKYSPFKCQASSVQQLRARQGFKERIRILRAAWAHGVIDDHSIALICSAA
LFEELTDGCIAGIEILNQAFTVVLPERRSQSYRLEFVFECYVRMLWRHHAELKLSKVWES
VVQGLQIYPSNPELFGALVEISHLHTTPNKLRLIFDNYCQKNPSVITWLFALTFEMSRGG
SQHRIRGLFERALGNEKLRNSVILWRCYITYEINVAGNPSAARRIFFRAIHACPRSKKLW
LDGFLKLHTVLTAKELSDLQEVMRDKELNLRTDIYEILLQDDIQL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaccacgctcatctggaatcaacgagacctttgcaatggagacacccatg
gaagcggcagcagaagagcccgcagccaccgccccagcctcgctgtttccagttgccctc
cgacccgcctccgacggtgatgccatcaccaacacccatcctcggcaatggctttgcaac
caaaccttcactaccgacctctccgtcattgaagacgctgtcaaacacacgaatctcgtg
gtgaaatcacaatcagaagaagaagaagaaggaggaatcaaaatagaggataaatatact
aggcttcagtcacacgcactagtggagtcgtcgtctgatggagagagagggagaaagaaa
aacaagaagaaggagaaggagaaggagaaggacaagaagaggaagatatcttattcttcc
tcttcttcacgctcagcctacaattttgatgccacttccaggaagccgaacgtttcatct
tgggatagttcgtcttctgacgccgccaaatccaccgccaaaaaatattacttcgattcc
cgtggcgatcgcgacaatctagccttcggatgcatttacagaatggatgttgctcgctac
aaactatgcaagtctatgaagtcttatgagatcaattacgagtggagtcggaagaatttg
ttctttgaaggagatagtgatattgatgcattgaacaatagacttaaatctggtggtcgc
tactggtctgcaaagtactctgcagttgaacgtcataagaacttgaagcggattcgaatt
atagtgcctatacaatcctcagtaactacccctggtgattttattcctttattggatgat
caaacttctggaaagggagttgatggtgggttaccttcaggagcttcagtagttgaagag
tcttgggaagatgaggtgttacgcagaacaatggagtttaacaagcagacgagggagcat
cctcacgatgagaaagtttggttagctttttctgatttccaagacaaggttgcaagcaag
caaccgcagaaaggtgctcgtttacagactcttgaaaagaagattagtatactggaaaag
gcaactgagctgaatccggataatgaagaactattgcttggtcttttgaatgcttatcaa
agcagagatggcactgatgtcttcattggtagatgggaaaaggttcttatgcagcatcct
gggagttacaaactgtggaaagagttcttgcgtgctgttcaaggggacttttccaggttc
aaagtttctgaaatgagaaaaatgtttgcaaatgcaatccgagctttatcttctgcgtgc
agcaggcagcataggcaggctcaccaaactgctaatgcactggatttggatgctgctatt
gtccaacaagaatttggtctggttgatatatttctcagcctttgcaggtttgagtggcag
gctgggtaccaagagttggctactgctttgtttcaggctgagatagaatatagtttgttc
tgtcctcctttacttctcactgagcagagtaaacatcggctgtttgagcacttctggaac
agtagtggtgcaagagttggggaagatggggctcctgggtgggcaacatggctggaaaaa
gaagaggaagaaaggaaaaaaattataagtgaggagtcctctaatgaaaatgaagaaggt
ggttggacaggttggtcacaaccattatctgaaactaaagatagtagtgcaaatccagaa
agcatcatggatgatgtggcacttgaggaacttgatgaggaatttgagacaatagctgtt
gagcagaaagatgatactgaggctttgcttaaaatgctgggtattgatgctgatactgat
cctaatagcgaggtcaaagacactataacgtggactagatggtcagaagaagagttatcg
agagattctgatcaatggatgcctattcgtgcaaaatctaatgggatttctcacggtaat
gccacaccagacagagaaggcaacgagcaacttttgagtgtaatattgtttgaagatgtc
tccgaatatttgttctctataagctcaaaggaagctcgtttgtttctggtattccagttc
attgatttctatggcgggagggtatctaaatggacttgcacaaacagctcaacttgggtc
gaaaatactctaagctttgtaaaactgccagattctatattagagaatttgagaagggta
catggtgttataaccacaacagaaagtagcccaagtaatttcagttttgagttcctttta
ggaagctcaaatgacatctcaatgaggactgacatgatgacatttcttcgcaatgccacc
ttgctttgcttaactgcatttccgcatgactatattttggaagaggctgttctagttgct
gaggagctattgaacacaaaaatggattcttgtagctgttcagtcactccttgtcgagct
ttagcaaagagcctagtcaaaagtaatcgtcaggatgtactactatgtggagtttacgca
cgaagagaggctgcctatgggaatgttgaccatgctagaaagattttcgacatggcatta
gcatccattgaagggcttccatcggatcttcgatcaaccgcatctcttttatatttctgg
tacgctgaagtggaaatcagtaacagttctagtagtggttcagagccatcattacgtgca
gtacacattttatgttgctttgggagtggggtaaagtacagtccatttaaatgtcaagca
tctagtgtgcaacagctgagagcacgccaagggtttaaagagcgaataagaattctaaga
gctgcatgggcacatggtgttattgatgatcattcaattgcgctcatttgttcagctgct
ttatttgaagagttaactgatggatgcattgctggtattgaaattctaaatcaggccttt
accgttgtgcttcctgaaagaagaagccagagctatcgacttgaatttgtgtttgagtgt
tatgtgaggatgctttggagacatcatgcagaattgaaactgtcaaaagtatgggagtct
gttgtacaaggcttgcaaatatacccttcaaatccagaactttttggtgctttagttgaa
atcagccaccttcatactacaccaaataaactgcggttgatatttgataactactgtcaa
aagaatccatctgtgatcacctggctctttgcattaacatttgagatgagcagaggaggt
tcacagcatagaatacgaggattgtttgaaagggcattgggaaatgagaagttgcgtaac
tcagtaatactttggcgttgctacattacatacgagattaatgttgcaggcaacccatct
gcagctagacgaattttcttccgagctatccatgcatgcccaaggtcgaagaagctatgg
cttgatggtttcctgaaattacacactgtcctaactgcgaaagagttgtcggatcttcag
gaagtaatgcgggataaggaactaaatctgaggacagatatatatgaaatcctacttcaa
gatgacattcaattgtag
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integrated database retrieval system
