Actinidia eriantha (wild kiwifruit): 130751805
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Entry
130751805 CDS
T09464
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130751805
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130751805
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
90S particles
Helicases
130751805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
HA2_N
DEAD
nSTAND3
ATPase
AAA_22
Sigma54_activat
AAA_19
Motif
Other DBs
NCBI-GeneID:
130751805
NCBI-ProteinID:
XP_057461494
LinkDB
All DBs
Position
17:complement(15944751..15956766)
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AA seq
1231 aa
AA seq
DB search
MWSSRNLGQVETVRERRRRVVQFSKVGLAVPHQPFKRKAAVCEIELDSDANHSVQELDEN
EFLQPVTADGEVISSLPIPFGSLEGLVCRSGLGTVDEFRATLPVEELTNKNSDTCMQEDA
QDSFRRQINGSMDQSDECLEMHISNTTNLADCPPQRVLSAPVVVHVSRPKDIENKRKDLP
IVMMEQEIMEAIKENITVIICGETGCGKTTQVPQFLYEAGFGSDQSSVRRGIIGVTQPRR
VAVLATAKRVAFELGFCLGKEVGFQVRHDRRIGDSCSIKFMTDGILLREVQSDFLLKKYS
IIILDEAHERSLNTDILIGMLSRVIQQRQIIYDEQQRKIISGDRISPESMISPLKLVLMS
ATLRVEDFVSGTRIFRNPPPVIEVPTRQYPVTIHFSKRTEIVDYIGQAYKKVLSIHKRLP
TGGILVFVTGQREVEYLCRMLRKASKELVEKSSNRNMDKEVSKASAGNAIEEYDMNEVNE
AFEMHGNSHHDQTDRFSSYDEDLGDFDDNESDFSDDLGSDSDLEGMDDADFLNEETETDN
DLSEVFGEGSLVSLKAAFEVLAGKTISDPHSDEKQIVPSSLKGCSNQSIPCVEEKRDGAN
GLCAGVMCVLPLYAMLPASAQLRVFEETKEGERLVVVATNVAETSLTIPGIKYVVDTGRE
KVKNYNSSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNIFLDFSSAEI
SKIPVDGVVLLMKSIGVHKVSNFPFPTPPEATALSEAERCLSTLEALDTNGRLTPLGMAM
AQYPMSPRHSRMLLTVVQIMRKVKTYTRANLVLGYTVAAAASLSLSNPFIMQFEGSHTDI
NVLKKDEESDSGDSKKAKDKEEKLRRKNLKESAKQSRTKFSNPSSDVLTIAYALQCFELS
GNPVDFCNEHALHLKTMEEMSKLRKQLLQLVFNQSFNGRQEEFSWTHGTMEDVERAWRVS
SDKHCLLLNEEELLGQAICAGWADRVAKRIKGVTSSGGDRKVNAVRYQACMVKETVFLHR
WSSVSRSAPEFLVYSELLYTKRPYIHGATSVKSDWLVKYAKSLCTFSAPLEDPKPYYDSL
TDQVFNWVVPTFGPHLWRLPLHGAPILDDVHRAAVFAFSLLEGRVLPCLKSVRKFMAASP
ASILRPEASGQRRVGNLLNKLKTRSRVIDSCAMLREAWNENPIELHLEVRNWFQEGFLDQ
FEDLWAKMQQEVLLDPKERFPKRTKRERKDK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcatcacgaaaccttggtcaggttgaaactgtgcgtgaaagacgcagaagggtt
gtgcagttttctaaggtgggtttagcagtgcctcatcaacctttcaagagaaaggctgct
gtttgtgaaattgaactcgattctgatgcaaaccattcagtgcaagaacttgatgagaat
gagtttctgcaacctgtcacagctgacggagaagtcatatctagccttcctattcctttt
ggatctttagaaggattagtttgtagaagtggacttggtacagttgatgaatttcgtgcc
actttgcctgttgaggaattgaccaacaagaacagtgacacctgcatgcaagaagatgct
caagattcttttaggaggcaaattaacgggtccatggatcagtcagatgagtgtctggaa
atgcatatcagcaatacgactaacctggcagattgtcctccacaaagagttctatctgct
ccagttgtggtgcatgtatcaagaccgaaagacattgagaacaagaggaaggatcttcct
atagtcatgatggagcaggagataatggaggccataaaggaaaacatcactgttattatt
tgtggggagactggttgtggtaagaccactcaagttccacagttcctttatgaagctggt
tttggttcagaccagtctagtgtcaggagaggcattattggtgttacccagccacgccgt
gttgcagttcttgcaactgccaagcgggtagcttttgagcttggcttttgtctaggcaag
gaggttggctttcaagttaggcatgaccgtaggattggagacagttgctcgatcaagttt
atgacggatggtattttgctacgagaagtacagagtgatttcttattgaagaaatactcg
atcataattttagatgaggcccatgagaggagcttgaacactgacatacttattggaatg
ctttcacgtgttatacaacagcgccagataatatatgacgagcagcagcgtaagatcatt
tcaggagacagaattagccctgaaagtatgatctctccactgaaattggtgctgatgagt
gccacattgcgagttgaagactttgtttctggaacaaggatatttcgtaatcccccacct
gtaatagaagttccaacccgacaatatccggtaactatacacttctcaaagcgaacagag
attgtggactacattggccaagcctataagaaggtcttgtcaattcacaagagactgcca
accggtggcatacttgtctttgtaactggtcagagagaagtagagtacttgtgccggatg
ctacgtaaagcttcaaaggaactagttgagaaaagttctaatagaaatatggataaagag
gtttctaaagcatcggcagggaatgctattgaggaatacgatatgaacgaggttaatgaa
gcatttgagatgcatggaaactcacaccatgatcaaactgataggtttagttcttacgat
gaagatcttggggattttgatgataatgagtcagatttttctgatgatttgggttcagat
agcgatctggaaggcatggatgatgcggatttcttgaatgaggaaactgagactgacaat
gatctttctgaagtctttggagaggggagccttgtttcattgaaggctgcatttgaggta
ttggccggaaaaactatctcagatcctcattctgatgagaaacagattgttccttctagt
ctgaaaggatgctcaaaccaatccattccctgtgtggaggagaaaagggatggagcaaat
ggtctctgtgctggtgtaatgtgtgttcttcccctttatgctatgcttcctgcatcagca
cagcttcgtgtgtttgaagagactaaggaaggagaacgcctggttgttgttgccactaac
gtagctgaaacctctttaactatcccaggtataaagtatgtggttgacacgggaagagag
aaggttaagaactataactcatccaatggcatggaaacatatgaaatccagtggataagc
aaggcatctgctgctcaacgtgcaggaagagctggaagaacagggcctggtcactgttat
cgcctctattcttcggctgtctttaataacatttttcttgacttctcaagtgccgagata
tcaaaaatccctgttgacggcgtcgtcctcctaatgaagtccattggtgttcataaggtt
tcaaatttcccatttcctactcctcctgaggctactgccttgtctgaagcagagcgttgc
ttaagtactcttgaagcacttgataccaatgggagactgacgcccctaggtatggctatg
gcacagtatcccatgagtcctcgacactcccggatgctccttacagttgtccaaataatg
aggaaggtgaaaacctatactcgggcgaaccttgttctcggatacacagtggcagcagct
gcatctttgagcttgtcaaatccatttataatgcagtttgagggaagccacacagatatc
aatgtcttgaagaaggatgaggagtctgactctggagatagcaagaaagctaaagacaag
gaagaaaagttgagaagaaagaatctaaaagaatctgctaaacagtctcgcacaaaattt
tccaaccccagcagtgatgttttgaccatagcttatgctttgcagtgctttgaactatct
ggaaacccagtggatttctgcaatgaacacgcgttacacctgaaaacaatggaggaaatg
tccaagctgagaaagcagctacttcaactagtgtttaaccaaagtttcaatggtcgacaa
gaggaattctcgtggactcatggcactatggaggacgtagaacgtgcttggagggtttcc
tctgataagcattgtcttctgctgaatgaggaggagctcttgggccaagctatatgtgct
ggttgggcagatagggttgctaaacgcattaaaggagttacatcatcagggggagaccga
aaagttaatgcagttcgctatcaggcttgcatggttaaagagacagttttcctccacaga
tggtcatctgtctctagatctgccccagaatttttggtgtacagtgagttgctgtataca
aaacgaccatacatacacggagcaacaagtgtgaaatccgattggcttgtcaaatatgcc
aagtctctctgcactttctccgcacccctagaagatcctaaaccttattatgattctctg
accgaccaagttttcaattgggtcgttccaacttttggccctcatctgtggaggctccca
ttgcatggtgctcctatcctagatgatgtgcacagagcggctgtgtttgctttttcattg
cttgaaggtcgtgtgttgccgtgcttaaagtctgtcaggaagttcatggcagcctcacct
gccagcattttgaggccagaggcatcgggtcaaagaagggttggaaatcttctaaataag
ttgaagaccagatcgagagttattgacagctgtgccatgttaagagaggcgtggaatgag
aatcctattgaattgcatttggaagttcggaactggtttcaggagggtttcctcgatcaa
tttgaagatctttgggccaaaatgcaacaggaggttcttttagaccccaaagaacgtttt
cccaaaaggaccaagagagagagaaaggataaataa
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