Actinidia eriantha (wild kiwifruit): 130752107
Help
Entry
130752107 CDS
T09464
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130752107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130752107
Enzymes [BR:
aew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
130752107
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130752107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
130752107
NCBI-ProteinID:
XP_057461882
LinkDB
All DBs
Position
17:12461363..12470587
Genome browser
AA seq
718 aa
AA seq
DB search
MKNQWIVRVLSKTLTLASHTRSLCSSTTTSSPSTTFSLKNVTKSNFESALTDLRCLVRDA
DFVSIDLEMTGVTSAPWRESLECDRFDIRYLKTKDSAEKFAVVQFGVCPFRWDRSKQSFV
AHPHNFYIFPRQEIPVDWPSYEFLCQTTSLDFLAKYQFDFNLCIQEGISYLSRGQEDEAF
RRLHIVYEDELSEMQCNLREARDTPLVRVADVLFTERMKNRISEWRDGLLLHRKGGSKFQ
ESSSDSSQQFQTIFFKMRPALLLTGFTSRQLRLIQLVTEKHFEDLVYIYTNVETSSVQIV
YTDSKNDREGLVKEVKDGRRKEAEMKIKAAVGFRHVFDLLSSEQKLIVGHNCFLDIAHIY
SKFVGPLPLTAEEFSTSIHKYFPYIIDTKILLSANDVLRPMMKKGSTSLAKAFACVCPEI
ASGVNGSGLGLKPRVKVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACNHLGFDFK
LHSPFTNLTNDEKLRKHINLLYLSWFSGEIIDLRTGKQTAESSYYNSLKTKYPKIVFSNI
ALIWGFPLKLKAREIRECISKTFGPLSVTLVYNLDETAVFVQFSKAELVSDFLRLKEILE
RSNGPISVLHPLSKLLEGGNTRAATYEVYKEICSSPTSEVLFADQAEMIGIKWKTESVGS
NAEAETRVGETFIRGDEMNANESDLGKISSMINDLSRGHFRESEIIDSSYPAEAQVSK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcaatggatagttagggtcctctccaaaaccctaaccctagcctcccacact
cgctctctttgctcttcaaccacaacatcgtcgccgtcgacgaccttctctcttaagaac
gtcaccaaatcgaacttcgaatcggctttaaccgacctccgatgcctcgtcagagacgcg
gatttcgtgtcgatcgacctcgagatgaccggcgtcaccagcgccccgtggagagagtcc
ttggagtgcgaccgcttcgacattcgctacctcaagaccaaagactccgccgaaaagttc
gccgttgtccagttcggcgtctgtcccttccgatgggaccgctcgaagcaatccttcgtc
gctcacccgcacaatttctatatattcccgcggcaagaaattccagttgattggccgtcc
tatgagttcctatgccaaacaacctcacttgatttcttggctaaataccagtttgatttc
aatctgtgtatacaggaaggaatatcttatttatccagaggacaagaggatgaagcattt
aggcgcttacatattgtgtatgaggatgagttgtcagagatgcagtgtaacttgcgagaa
gctagagatacaccattagttagagttgctgatgttctcttcactgagagaatgaagaac
agaatcagtgaatggcgtgatggattgttattgcatagaaagggcgggtctaaatttcag
gagagctcaagtgactccagtcaacaatttcaaactattttcttcaagatgcgtccagct
cttttgctcactgggtttacctctcgccagttaaggttgattcagttggtcacagaaaag
cattttgaagatcttgtttacatttatacaaacgttgaaacttcttctgtacaaattgta
tacacagactccaaaaatgacagggagggacttgtgaaggaggtcaaggatgggcgtcgc
aaagaagcagagatgaaaatcaaagctgcggttggatttcggcatgtttttgacctcctt
tcctcagagcagaagctgattgttggtcacaattgctttcttgatattgcacacatatat
agcaaatttgtaggtcctcttcctttgactgctgaagaattttccacctccattcacaag
tacttcccatacattattgacacaaaaatactcttgagtgcaaatgatgtactccgacct
atgatgaagaagggcagcacatcactagccaaagcatttgcctgtgtgtgtccagaaatt
gcttccggtgtcaatggatctggtttgggtttgaagccacgtgttaaagtggaggttcaa
gtggatgacatgaggtcttcgaactggaactctggagctaagcatgaagccggctacgat
gcttttatgacgggatgtgtctttgcacaggcatgcaatcatctaggtttcgatttcaag
ctccattcacctttcacgaatttgaccaacgatgagaagcttcggaagcacatcaatctt
ctttatttaagctggtttagtggtgaaattatcgatctgagaaccggtaagcagactgca
gagtcttcttactataacagcctaaaaaccaagtatccgaagattgtgttctcaaatatt
gctttaatatggggatttccgctcaagctcaaggcaagggagatcagggaatgcatctcc
aaaacctttggcccgctctcagttactttggtctacaacttggatgaaactgcagtgttc
gttcagtttagtaaggctgaattagtctccgattttttgcggctgaaagaaatcttggaa
agaagtaatggtccaatctcagttttgcatccgctctcgaagcttttggaaggtggaaac
actcgtgcagccacgtacgaggtttacaaagagatttgcagttcaccaacttcggaagtc
ttgttcgcggatcaggcggagatgattggtatcaaatggaagaccgaatcagtagggtcc
aatgcggaggcagaaacccgagtaggtgaaaccttcatccgaggagatgaaatgaatgct
aacgaaagtgacttggggaagataagcagtatgataaatgatctatctcgtggccatttc
cgagagagtgaaatcattgattcgtcatatcctgctgaagctcaggtcagcaaatag
DBGET
integrated database retrieval system
