Actinidia eriantha (wild kiwifruit): 130752130
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Entry
130752130 CDS
T09464
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130752130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130752130
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130752130
mRNA cycle factors
Common to processing body (P body) and stress granule
130752130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
130752130
NCBI-ProteinID:
XP_057461911
LinkDB
All DBs
Position
2:complement(14069886..14080811)
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AA seq
980 aa
AA seq
DB search
MMTIPMDNTPDISSRERVQRLYNKNAELENRRRKAAQARIPSDPNAWQQMRENYEAIFLE
DYAFSEQHEIEYALWQLHYRRIEELRALLSTALASAGSTSSQNGKGTTRQGPDRITKIRS
QFKTFLSEATGFYHDLMVKIRANYGLPLDYFSYDQENQILSKDGNISTEVKKGLISCHRC
LIYLGDLARYKGLYGEGESKTRDFAAASSYYVQASSLWPSSGNPHHQLAILASYSGDELV
AVYRYFRSLAVENPFTTARDNLIIAFEKNRQSYCQLLGDAKASVKMAPMRVTGKGRRKGE
TRVLKDNRIEASLFKERASSIPDTFKAFNIHFVRVNGILFTRTSLETFGEVFSMARSDLL
ELLASGSDEEYNFGSDAAECRLVIIRLAAVLICNVHNVNREAENQSYAEILQRSVVLQNA
FTGIFDFMGLIVERCFQLNDPSTSYLLPGIMIFVEWLACRQDIAVGSEVEEKQANARSYF
WSHCVSFFNKLLSSGFSSINEDDNETCFFNMSSYDESETTNRLALLEDFELRGFLPLLPA
QLILDFSRKQSFGNDGGNKEKKARVQRIIAAGKALANVVQVGQQGIYFDPKMKRFIIGVK
PQMSDDYSLSSPLGLSTLNATWEKNPAPSQLNLGLLQLKPQLYMEGEEEDEVIVFKPNTS
EKHANGVAPKLAASEVLVPSVYGSKVDLGGQSGSVSASSDGFLLQNAFSTRSSLPSSLAN
VTTQYLQLIQPNTSKWLVDQEVPIANELTSLSLVKNGFPMKHELQDQLGALQATACSVPF
PHQSVNLSSGYKYAVQVPETSVPSKLDSIMSSGAVVDSLFVKPSLLKPAGLRKNPVSRPV
RHSGPPPGFSSIRPKLVDESWSGVTLKNENPPMDDYSWLDGYMLPPGGVFNNSKNQPVQS
YHPVSKSNSSMGTVSFPFPGKQTPTLQDQVEKQDVWLGNQLSESLKLFQEQHQFRNGNQQ
SITLPEQYQGQSLCEGRFFL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgactattccgatggataatactccagatatatcgtcaagagaacgcgttcaacgt
ctttacaacaagaatgctgaattggagaatagacgtcggaaagcagcacaggccagaatc
ccgtcagatcccaatgcatggcagcagatgcgagagaactatgaagctattttcctagaa
gattatgctttctctgagcagcatgaaatagagtatgctttgtggcagttgcattacagg
agaatcgaggagttacgcgcactccttagcactgctcttgcgtcagcaggatccacatca
tctcagaatgggaaaggtaccacgcggcagggacctgatcgaatcacgaaaatacgttcc
cagtttaagaccttcctttccgaagcgactgggttttatcatgatttgatggttaaaatt
agagctaattatggtctaccactggattatttctcatatgaccaagaaaaccagattttg
tctaaagacggaaatatatctactgaagtgaagaaaggcttgatctcttgccaccgttgt
ttgatttacctaggggatctagctcggtacaaagggttatatggggagggggagtctaaa
acacgagattttgcagcagcctctagttactacgtgcaagcttcttcactttggccttca
agtggcaaccctcatcatcagcttgcaatactggcttcgtactccggggatgaattggtg
gccgtttacagatatttccgaagtctggcagttgaaaacccttttaccaccgcaagggat
aatttaatcattgcatttgagaagaatcgtcagagttattgccagctgcttggggatgcc
aaagcttcggtcaagatggcccccatgcgggtgactggaaaagggagacgaaaaggtgaa
acgagggttctgaaagataatagaatagaagctagtcttttcaaggaaagagcatctagt
atacccgacacttttaaagccttcaacattcattttgttcgagtaaatggcattctcttc
acacggacaagcttagagacatttggtgaagttttctctatggctagaagtgatttgctt
gagcttcttgcttctgggtcagatgaggagtacaattttggttcagatgctgccgagtgt
agactagtgattattagactggcagctgttctcatatgcaatgttcacaatgtgaataga
gaggctgaaaatcagtcttatgctgaaattttacaacgctcagttgtgcttcagaatgcg
tttactggtatttttgacttcatgggcctcattgttgagagatgcttccagttgaacgac
ccttcaacgagctatctgttgcctggcattatgatttttgtggaatggttagcttgtcgg
caagatattgcagttggctctgaagtggaggagaaacaagctaatgctagatcatatttt
tggagtcattgtgtttccttttttaacaagctgttgtccagtgggttctcctctattaat
gaggatgacaatgaaacatgttttttcaatatgagcagctatgatgaaagtgaaactacc
aatcggctggcattgcttgaagacttcgaattgagaggatttctacctcttcttcctgca
caactcatccttgatttttcaaggaagcagtcatttggaaatgatggtggcaacaaggag
aagaaagctcgtgttcagaggattatagccgctggaaaggctcttgctaatgttgttcaa
gttggacaacaggggatttattttgatccaaagatgaagagattcattattggtgttaag
ccacaaatgtctgatgattattcactttccagtcctttggggctctccacattaaatgct
acatgggaaaaaaatccagcaccgagtcaactgaatcttggactcttgcagctgaagccg
caattatacatggaaggggaagaagaagatgaggtgattgtcttcaaaccaaatacgtct
gagaagcatgctaatggggttgctccaaaattggctgcctctgaggttttggtgcccagt
gtttatggctccaaggttgatttaggaggtcaaagtggatctgtttcagcttcaagtgat
ggtttccttttgcagaatgctttcagtacaaggtcaagtttaccttcttctcttgctaat
gttacaacccagtacttgcaattaatccaacccaatacttcaaagtggctggtagatcaa
gaagttcctattgcaaatgaactgaccagtttgagtttagtgaaaaatggctttccaatg
aaacatgagttacaagatcaattaggagctttgcaggctactgcttgttcagttccgttt
ccgcaccagtctgttaatctcagttctggatataaatatgctgttcaggtcccagaaact
tcagtaccttctaagcttgattcaattatgtcatcaggagctgttgtggatagcctgttc
gtgaaaccatcgctactgaagccagcaggtttgagaaagaatccggtgagccgacctgta
aggcattccggtccccctcctggattcagctccatccgtcctaaacttgtggatgagtcc
tggtccggtgtaacgttgaagaatgaaaatccaccaatggatgattatagttggctcgat
gggtatatgttgccaccaggtggggtgttcaataattccaaaaatcagccagtgcagtca
taccaccctgtgagtaagagcaatagctcgatggggacggtaagctttccctttcctgga
aaacaaacgccaacattgcaagatcaggtggaaaaacaggatgtttggctgggcaatcag
ttgtcagagagtctgaagctgtttcaggagcagcaccaatttcggaatggtaatcagcag
tctattacgctgccagagcagtatcaaggacagtctctctgtgaaggtcgtttctttttg
tga
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