Actinidia eriantha (wild kiwifruit): 130753075
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Entry
130753075 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130753075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130753075
03036 Chromosome and associated proteins [BR:
aew03036
]
130753075
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130753075
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130753075
Chromatin remodeling factors
BAF complex
130753075
PBAF complex
130753075
GBAF(ncBAF) complex
130753075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
EF_TS
Motif
Other DBs
NCBI-GeneID:
130753075
NCBI-ProteinID:
XP_057462987
LinkDB
All DBs
Position
18:14110117..14125069
Genome browser
AA seq
2249 aa
AA seq
DB search
MQSGGGAQQGHGGHGRSTAAAGPPSSSASPSSSSSAVSAPHLGFDSIQQYQQQQRQSLQQ
QLLRKPEGNEAILAYQAGGLHGLLGGGNFASSSGVMQLPQQSKKFIDLAQQNSAAHIREE
GQNRSQGIEQQMMNPVQQAYLQYAFQAAQPKSAPGMQSQQQAKMGMVGPLSGKDQNTRMG
NLKMQDLMSIHAAAQAQASSSQKQPEHFGRAEKQTEQSQPAVSDQRSDPKPPIQPTSMSH
LMQANVVRPIQAPQAQQTIHNNANSQLAMNAQIQAMQALARERNIDLSLPANANLVAQLI
PLMQSRMLAQQKTNENNMGAQSSPGSMPKQQVASPQIARESSPHQNSSSDMSGQSGSSKA
RQTVAPGPFGTTSNATTVNIANNITAQQRSANGRENQVPLRQTMLIGNGMPPMHPPQSPL
NLNQGLDRSSHSKSMSAGPETLQIQHARQVNRSSPQSAASTSDGSLGNSFSSQGGTVPQM
QQQRTGFTKQQLHVLKAQILAFRRLKKGDATLPQELLRAIAPPPLETQLQQVPLPTGTST
KDRSVGENAEARVKQLEASETDPQVVASSSGLKDSKEEAFAGDEKATALKDHSQGMTSLT
KETLPVVPSGKEEQETAIFPVKPEPEVERSNQKTPFRSDLSVDRGKAVAPQVAVSETLQA
KKPLQASNASQPKDVGSTRKYHGPLFDFPFFTRKHDAFGSAMMVNNNNLTFAYDVKDLLL
EEGMEVLTKKRTENLRKISGLLAVNLERKRIRPDLVLRLQIEEKKLRLMDLQARLRDEVD
QQQQEIMAMPDRPYRKFVRLCERQRMDLTRQVHASQKAMREKQLKSIFQWRKKLLEAHWS
IRDARTARNRGVAKYHEKMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGE
AAERYNVLSSFLTQTEEYLQKLGSKITAAKNQQEVEEAANTAANAARAQGLSEEEVRAAA
ACAGEEVTIRNRFSEMNAPKDSSSVSKYYHLAHAVNERVTRQPSMLRAGTLRDYQLVGLQ
WMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSEFH
NWLPSVSCIFYVGGKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDE
AQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWF
SKPFQREGPTHSAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKISIVLKC
RMSAIQSSIYDWIKTTGTLRVDPEDEKRRVQKNPMYQPKTYKPLNNRCMELRKVCNHPLL
TYPYFNDLSKDFLVRSCGKLWIMDRILIKLQRTGHRVLLFSTMTKLLDLLEEYLQWRRLV
YRRIDGTTSLEDRESAIVDFNSPGTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKN
EEQAVARAHRIGQTREVKVIYMEAVVDKISSHQKEDEFRSGGVVDSEDDLAGKDRYVGSI
ESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQE
VNRMIARSEEEVELFDQIDEEFDWAEEMTRYDQVPKWIRASTREVNATVASLSKKPSKNT
LLGGGIGGISEMTSDLPEKRRGRPKGRKFPNYRELDDDNGEFSEASSEERNEYSAQEEEE
DIGDFEEEEYTGTMGAAPVNKDQSEEDGPVCTGGYDYPRASENTKHDHAVEEAGSSGSSS
DSQRSTQMVSLSISSKKFGSLSALDARPSSLSKRLPDELEEGEIALSGDSHVDLQQSGSW
IQDRDEGEDEQVLQPKIRRKRSIRLRPRLTNTAERQEEKYPKEKPNLHLGDSSQLPFQVD
HKYEPQFVNDSEPRTPGEPNVLKHDQSESSLKSRRNLPLRRTANSSKLHAPKSGRLDSMS
APAPSGDAGEHSRGSWDGKVMNSSGTSNDGRKMSDVIQRRCKNVISKFQKRIDKEGPQIV
PLLTDLWKRIENSSYLSGPANNLLDLRKIDQRIERFEYNGVMELVFDVQFMLKSAMQYFG
FSHEVRSEARKVHDLFFDILKIAFSDTDFREARNALSFASSVATSTPAPSVRQPVAGQSK
RHKPINEVELDPSPPQKPRSVPSGEDTRLTRSHMPPNESRIVNSKEQQDDLRFLTHPGEL
VVCKRKRNDREKSALKPGNGSAGPGSPRSVGRSTRSPGQGPIPKETRSSQRFALQQPPQQ
VNSGNGIVGWANPVKRLRTDAGKRRPSHL
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgggaggtggggcccagcagggccacggtggccatgggcggagcacggcggcg
gcgggaccgccttcttcttctgcatcgccgtcgtcttcctcgtcggccgtgtctgcccca
catttagggtttgattcgatccagcaatatcagcagcagcagaggcagtcattgcaacag
caattgcttagaaaacctgaagggaatgaagctattctagcctaccaggctggtggtctc
catggtcttctgggagggggcaatttcgcttcatcttctggtgtgatgcaactgcctcaa
cagtccaagaagttcattgatttggctcaacaaaatagtgctgctcacattcgggaggag
ggccaaaataggagtcaaggaattgagcagcaaatgatgaaccctgtccagcaagcttac
ctccaatatgctttccaggcagcccaaccgaaatcagccccggggatgcaatctcagcag
caagcaaaaatgggaatggtggggcctctatcagggaaggatcagaacactaggatgggt
aatctcaagatgcaggatctcatgtctattcatgcggctgctcaggcacaggcatcttcc
tcccagaaacagcctgaacattttggtcgagctgagaagcagacggagcaatcacaacca
gcagtttccgatcaaaggagcgatccaaaacctccaatccagccaacttctatgagccac
ttaatgcaggcaaatgttgtaagacctattcaggcacctcaggctcaacaaaccatccac
aacaatgcgaacagccagcttgccatgaatgcacagattcaggcaatgcaggctttggca
cgtgagcgcaatattgatttgtcacttcctgcaaatgccaacctggtcgctcagcttatt
ccactcatgcagtctaggatgcttgcacagcagaagacaaatgaaaacaatatgggcgca
cagtcttcacctggctcaatgccaaagcagcaggtggcttctccacaaattgcaagagag
agttctccccatcaaaattcgtcgagtgatatgtctggacagtctggctcttccaaagct
aggcagacagttgcgcctggcccgtttggcacaacttcgaatgctacaacagttaatatt
gcgaacaacattacggcacagcaacgatctgctaatggcagagagaatcaggtgcctctg
agacagacaatgttgattggtaatgggatgcctcccatgcaccccccacagtcacctttg
aacttgaaccagggtttggatcgttcatcccattcaaaaagcatgtcagctggtccagaa
actttgcaaatacagcatgctaggcaagtgaaccgttcttctccacaatctgctgcttca
actagtgatggaagcctgggaaattccttttcatctcagggtggaacggtgccccagatg
caacaacaacgtacagggtttaccaaacagcaactgcatgttcttaaagcacaaatacta
gcatttaggcgtctgaagaaaggagatgcaactcttccacaagaactacttcgagccatt
gcgccaccacctcttgaaacccaactgcagcaggtgccgcttcctactggaacaagtact
aaggatagatctgttggagaaaatgcagaagcccgagtaaagcaattggaggccagtgag
acagaccctcaggttgtagcatcatctagtggattgaaggattcaaaagaggaagctttt
gcaggagatgagaaagcaactgctttgaaagatcattcacaaggtatgacaagtttgacg
aaagagactctgccagtggttccttctggaaaggaagagcaggaaacagccatattcccc
gttaaacctgaaccagaagttgaacgtagtaaccagaaaacaccttttcgaagtgatctt
agtgtagataggggaaaggcagttgcaccacaggttgctgtatctgaaacactgcaagct
aagaaacccttacaagcaagcaatgcatcacagccaaaagatgtcgggtctaccaggaag
tatcatggaccactatttgattttccatttttcactcgtaaacacgacgcctttgggtct
gctatgatggtgaacaacaacaatttgacatttgcatatgatgtcaaggatctgcttctc
gaggaaggaatggaagtgcttaccaagaaaaggacagaaaatttgaggaagatcagtggt
ttactagcagtgaacttggagaggaaaaggatccggccagatcttgttctccggctgcaa
attgaagagaagaaacttcgacttatggatcttcaggcacgcttgagggatgaagttgat
caacagcaacaggagataatggcaatgcctgaccggccctatcggaagtttgttcgactt
tgtgagcgtcaacgcatggatctcactaggcaagtacatgcctctcagaaagccatgaga
gaaaaacaactgaaatccatttttcagtggcgtaagaagcttcttgaggctcattggtct
atccgtgatgcacgaactgctcgtaacaggggagttgcaaaatatcacgagaaaatgttg
agggagttctcgaaaagaaaggatgatgatcgtaataaaaggatggaagcattgaagaat
aatgatgttgagaggtatagagaaatgttgctggagcagcagactagcatccccggtgaa
gctgctgagagatacaatgttctctcatcatttttaacgcagacagaagagtatcttcag
aaactgggaagtaaaattacggctgcaaagaatcaacaggaggtcgaggaagcggcaaat
actgctgccaatgctgcacgagctcagggtctctctgaagaagaagtaagagctgcagca
gcttgcgctggagaggaagtaacgataagaaaccgtttctctgagatgaatgcacccaag
gatagctcatctgttagcaagtattaccatcttgcacacgctgtgaatgaaagggttaca
aggcagccctcaatgctacgtgccggaaccttaagagattatcaacttgttggattgcaa
tggatgctttctttgtataacaacaaactaaatgggattttggcagatgagatgggtctt
gggaagactgtacaggtaatggcattgattgcttatctgatggagttcaaaggaaactat
ggcccacatcttattattgtcccaaatgctgttatggtgaattggaagagtgagttccat
aattggttgccatctgtgtcctgcattttctatgttggtgggaaggatcaacggtcaaaa
ttgttttctcaagaggtttgtgcgatgaaatttaatgtccttgtgactacttacgagttc
atcatgtatgatcgttcaaagctttcgaaagttgattggaagtatattatcattgatgaa
gcacaacgcatgaaggatagggaatccgttctagctcgagatcttgatagatatcgttgc
cagaggcgcttgcttctcactggaacccctctacagaatgatctaaaagaactctggtca
cttctaaatctgcttcttcctgaagtttttgataaccggaaagcatttcatgattggttt
tcaaaaccctttcaaagggaaggccccacacatagtgcagaggatgattggcttgagact
gagaagaaggttataattattcaccgacttcatcaaattctggagccttttatgctccga
cgacgtgttgaagatgtggaaggctcacttccaccaaagatttccatcgttttaaaatgt
aggatgtcagctattcagagttccatttatgattggattaaaactactggtactcttcga
gttgatcctgaagatgagaagcgcagggttcaaaagaatcctatgtatcagcctaaaact
tataaacctctaaataatagatgcatggagctccggaaagtttgcaaccatccattgctt
acctacccttatttcaacgatttatccaaggatttccttgttagatcgtgtgggaaattg
tggattatggataggatcctcataaagcttcagagaacaggacacagagtactgctcttt
agtacaatgacaaaacttctagatttattggaggaatatctgcagtggcggcgacttgta
tacagacgaatagacggaacaactagcttagaagaccgtgaatcagccattgtggacttt
aatagtcctggcactgactgctttatcttcttgcttagcattcgtgctgctggacggggt
ttaaatcttcaaactgctgacacagtcattatatatgatcctgacccaaacccaaaaaat
gaggaacaggcagttgctagagcccaccgcatcggtcaaacaagggaagtgaaagttatt
tatatggaagcagtggttgacaaaatctcaagccatcagaaagaggatgaatttagaagt
ggtggggtagttgattcagaggatgaccttgcaggtaaggatcgttatgtgggatctatt
gagagtcttatacgaaataacatccaacaatacaaaattgacatggctgatgaggttatt
aatgctgggcgttttgaccagaggacaacacatgaagagaggcggttgaccctggaaaca
ttgttgcacgatgaggaaagatatcaagaaactgttcatgatgtcccctcactgcaggag
gtaaatcgcatgattgctagaagtgaagaagaagtagagctttttgatcaaattgatgaa
gaatttgactgggcagaggagatgacgaggtatgaccaagtacctaaatggattcgtgcc
agcacacgagaagtaaatgccactgttgctagtctgtcaaaaaagccgtccaagaacacc
ttattaggtggtggtattggcggcatcagtgaaatgacttcagatttacctgagaaaagg
agaggaagacctaaagggagaaagttccctaattacagggaactggatgatgacaatgga
gagttctccgaagctagttccgaagagaggaatgaatattctgcgcaggaagaagaggaa
gacattggggactttgaagaggaagaatatactggcactatgggggcggctccagtaaat
aaagatcaatcagaagaagatggtccagtttgcactggtggatatgattatccccgagct
tccgaaaacactaaacatgatcatgcagttgaagaagccggttcatcaggatcatcctca
gacagtcagagatcaacacagatggtttcgctttccatatcttctaaaaaatttgggtca
ctttctgcattagatgccagaccaagttctctttcgaaaagattgcctgatgaattagag
gaaggtgaaatagctttatccggagactctcatgtggacctccagcaatctggaagttgg
attcaagatcgtgatgaaggtgaagatgaacaggttttgcaacccaaaataagacggaaa
cgtagtattcggcttcgtccacgtcttaccaataccgcagagaggcaagaagagaagtac
cccaaagaaaaaccaaatcttcatttgggagattcatcccagttgccattccaagtggac
cataaatatgaaccgcagtttgtgaatgactctgaacccagaactcctggagagcccaat
gttcttaaacatgatcaaagtgagtcatccttgaaaagtagacggaatttacctttaagg
agaactgcaaattcatcaaaactacatgcaccgaaatctggaagattggattccatgtct
gctcctgctccctcgggagatgctggtgaacactcgaggggaagttgggatggtaaagtt
atgaactctagtgggacttcaaatgatggcagaaagatgtctgatgtcattcaaagaagg
tgcaagaacgtaatcagcaagttccagaagagaatagataaggaaggtcctcagattgtt
cctctgctaacagatttgtggaagaggattgaaaattctagttacctgagtgggcctgca
aataatcttttggatttgcgaaagattgatcagcgtattgagagatttgagtataatgga
gtaatggagcttgtgtttgatgtgcagtttatgttaaagagtgcaatgcagtattttgga
ttctcgcacgaggtgagatcggaggcaaggaaggtgcatgatcttttctttgatatctta
aagattgcattctcggacacggatttccgagaagctagaaacgccctctcgtttgctagc
tcagtagctacctccaccccagctccatctgtaagacagccagttgctggccaaagcaag
cgacacaaaccgataaatgaggtggaactcgatccaagtcctccccaaaagccgcggtct
gtccctagcggtgaagatacaaggctaacccgaagccacatgcctccgaatgaatcgagg
attgtaaacagcaaggagcagcaagatgatcttcgattcttaactcatccaggggagctc
gtcgtctgcaaaaggaagaggaatgaccgggaaaagtcagctttgaaacccggaaatggg
tcagctgggcccggatcacctcgtagtgtcggtcgtagcactagaagtccaggtcagggt
ccaatcccgaaagagacaagatcgagtcagcggtttgcccttcagcaacctccgcaacag
gtgaatagtggtaatgggatcgtgggttgggcaaatccggttaagagattgagaacagat
gctgggaaaaggcggccaagccatttgtga
DBGET
integrated database retrieval system
