Actinidia eriantha (wild kiwifruit): 130753316
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Entry
130753316 CDS
T09464
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130753316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130753316
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130753316
mRNA degradation factors
5'-3' decay
Decapping complex
130753316
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130753316
NCBI-ProteinID:
XP_057463293
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Position
18
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AA seq
839 aa
AA seq
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MLPSPGNAFFDASQYVFFGQENMEEVELGSLEDEEDDTPVVGYGDDEYHLFDKEGGSGVG
SLSDMDDLTTTFSKLNKDVTGPRHPGVIGDRGSGSISRESSSATEWAQEVDYPEWLDQQI
FDTQGFQEGKRWSSQPHTLVRVSETKPLHRTSSSPQQQMQQQHFSSEPNFAATALPHTSL
CLAEAKPLHRTSSYPQRQPQQHFSSEPILVPKLSFTSFPPPGGRSQQASPRNQSHHLNIS
SITGSHQLPFSAPNLSPLSSSNLHLAGLHHGLHYGGNMAQLNPSGLSINSLPQNHWANNA
DLFHGEHSNLLNNFFQQQLLQQKGILSPQLIPMQHQLQQHQQRIRLPVQPSLAHFSAMQS
QIFNALPSSPSHLSKYGLVDMRDQRHKSSSRSRRLSQQGSDTSNQKTDNSCLQFRSKNMT
AEEIESILRMQHSATHGNDPYVDDYYHQACLAKKAAESGSKHRFCPVHPKELSSRSRNST
ESLPHLHVDARGMVSFSSVRRPHPLLEVDPPSSAFANGSSEQVSEKPLEEEPMLAARITV
EDGLCLLLDVDDIDRLLQFSQLQDGGLQLKRKRQILLEGLAASLQLVDPLRKSGTSVGLA
PKDDIVFLRLGSLPKGRKLLSRYLKLLFPSSELARIVCMAVFRHLRFLFGGLPLDSSAAE
TINNLAKTVSTCVNGMDLNTLSACLAAVVCSSEQPPLRPIGNPAGDGASVILKSVLERAT
KLLTEPHAATNCSIPNPSLWQASFDAFFDLLTKYCVGKYDSIVKSINTQTHPSNDITGSD
ATRAISREMPVELLRASLPHTNEQQRKLLADFARKSTPVTGLDGHGGSSGRVTPESVKG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgctcccttccccaggaaatgcattctttgatgcatcacagtatgtattttttggacaa
gaaaacatggaggaagttgaattggggagtttagaagatgaagaagatgacactcctgtt
gttggatatggtgatgatgaataccatctatttgataaggaagggggatcaggtgttgga
tctttatcagatatggatgatctgacgacaacattttcaaagttgaacaaagatgttacc
ggaccaagacatccaggggtgattggtgatcgaggttctggatcaatttcaagagaaagt
tcttctgcgactgaatgggcacaagaggtagattacccagagtggttagatcagcagata
tttgacacacaaggtttccaagaaggcaaaagatggtcatcacagccacatactttggta
cgtgtttcagaaacaaaacccttgcacagaacgtcgtcatctcctcagcagcaaatgcag
cagcaacacttctccagtgaacctaatttcgcagcaacagcattgccacatacttcgcta
tgtcttgcagaagcaaaacccttgcacagaacatcatcatatcctcagcggcaaccgcag
cagcacttctcaagcgaacctattttagtacccaaattgtctttcacttctttcccaccc
cctggtggcagatctcaacaggcttcaccacgcaaccagtcacatcacctaaatatttca
tctattactggaagtcatcagttacccttttctgccccaaacctttctcctttatctagc
tctaatctacacttggcgggcttacatcatgggttgcattatggtggaaatatggctcag
ttaaacccttcgggtctttctattaatagcctaccgcaaaaccactgggccaataatgct
gatctgtttcatggggagcactccaacctcttaaacaatttttttcaacaacagttactt
caacagaaaggtatattgtctccacagttgataccaatgcagcatcagctgcaacagcat
cagcagagaattcgtctcccggttcaaccatcgttagcccatttctcagcaatgcaatcc
caaatatttaatgcccttccatcttcaccctcgcatttgagtaaatatggattagtggat
atgagagatcaaagacataaatcatcttctagaagtagacgtttgtctcaacaaggttct
gatacaagtaaccagaagactgataacagttgcctacagtttagatccaagaatatgaca
gcagaagagatagaaagtattctcagaatgcagcactcagccacacatggcaatgatcca
tatgtagatgattattatcaccaagcttgtcttgcaaaaaaagcggccgaatctgggtcg
aagcatcgcttctgccctgtccacccaaaggagcttagttctcggtcccggaacagcaca
gaatcacttcctcatctccatgtcgatgcacgtgggatggtctccttctcttcagtacgt
aggccacatcctctccttgaggtcgaccctccgtcctctgcttttgccaatggcagttcg
gagcaggtatctgagaagccactggaagaagaaccaatgcttgctgctagaatcactgtt
gaagatggcctttgtcttcttcttgatgtagatgatattgaccggctcttgcaatttagt
cagttacaggatggtgggcttcagcttaagaggaaacgacagatcctattggaaggcttg
gctgcctcacttcagcttgttgacccacttcgaaaaagtgggacctcagttgggctggcc
cccaaagatgacattgtgtttctgcgtttaggttctctcccgaagggtcgaaagctactt
tctaggtaccttaagcttctcttccctagcagcgagcttgcccgcatagtttgcatggct
gtcttccgtcatttgaggtttttatttggtggtcttcccctggattcaagtgcagccgag
actataaataatcttgcaaagacagtttctacatgtgttaatggaatggaccttaatacc
cttagtgcttgtcttgctgcagtagtttgttcatcagaacagccacccctccgtcctatt
ggaaaccctgctggagatggggcttcggttattttaaaatctgttcttgagagggcaacc
aaactgctaactgagcctcatgctgctaccaactgtagcatacccaacccttccctttgg
caggcatcttttgatgccttctttgatctcctgaccaagtactgtgtcggtaagtatgac
agtatagtaaaatcaataaatacacagacccacccaagcaatgacattactggttccgat
gccactagagccataagcagggaaatgcctgtcgaacttctacgtgctagtcttccacac
actaacgagcaacagaggaagctgttagctgattttgctcgaaaatctacacctgtcact
ggacttgatggtcatggagggagcagtggtcgagtaactcctgaatcagtgaagggctag
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