Actinidia eriantha (wild kiwifruit): 130753366
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Entry
130753366 CDS
T09464
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130753366
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
130753366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_LRRK2
WDR54
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
BCAS3_WD40
Beta-prop_SPT8
Beta-prop_BBS7
PEP5_VPS11_N
S-Me-THD_N
Motif
Other DBs
NCBI-GeneID:
130753366
NCBI-ProteinID:
XP_057463364
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Position
18:22850195..22860077
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AA seq
454 aa
AA seq
DB search
MDPELVIASSAADAGIGCWDLHSGAEHLRYRSCASPPHGLVCVGRCFLASSQLRPPSSSS
SGSVLYWSWNKPQVEVKSFPAEPINPLASNSDGTYIVGGGASGDMYLWEVATGRLLKKWH
AHYRAVTCLVFSDDQSLLISGAEDGSVRVWSLLMIFDDMRREQARHLYEYSFSEHTLRVT
DIATGYGGCNAIIVSASEDRTCKVWSLSKGKLLRNIVFPSIIDAIALDPGEHVFYAGGRD
GKIYIAALTAQGTSSNSYGMHIIGSLADHSKPVTCLAFDADGVLLVSGYEDGVVRVWDTK
SHNIVRVFKHAKGPVNNILVARPPLCSNPRMLLNSQSSSIRRHGSSLPPPLEKYTNSTDE
ILEVKAYLSTEATSDTPLDASYISIQTMNNQIKELQQQGSSAAAGMEMDRLKLDYKKSSQ
MVQQWKKMYENLHEFCVNELLDGDQAGDCNGNST
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatccggaactagtgatcgcttcgtcggccgccgacgctggcataggttgctgggac
ctgcactccggcgcggagcaccttcgttaccggtcgtgcgcctcccctccccacggcctt
gtgtgcgttggccgctgtttcctagcctcctctcagctccgcccaccctcttcctcttcc
tccggctccgtcctctactggtcctggaacaagcctcaagtggaagttaagagcttccca
gcagagccaatcaatccgctcgcctctaatagtgatgggacttatattgttggaggaggt
gcttctggggatatgtatttatgggaggttgcgacgggaagactgcttaagaagtggcat
gctcattatagagctgttacttgcttggtattctccgacgatcagtctctattgatttct
ggggcagaggatggatcagttagagtctggtctcttctcatgatatttgatgatatgcgg
agggagcaagcaaggcacctctatgagtatagcttctctgagcacactttacgtgtgact
gatattgccacgggttatggaggatgtaatgcaattatagtgtccgcttctgaggatagg
acatgcaaggtttggagcttatcaaaggggaagctattgagaaatattgtattcccatca
ataatcgatgcaattgcattggaccctggtgagcatgtcttttatgccggaggtagagat
ggcaagatctacattgctgcactcaccgctcaaggcacctccagcaacagttatggaatg
catattattggttcattggctgatcacagtaagcctgtcacttgcttagctttcgatgcg
gatggagtgttgttggtgtctggctatgaagatggagtagttagagtctgggacactaaa
agtcataacattgttcgggttttcaaacatgcgaaaggtcctgttaacaacattcttgtt
gctagacctccactgtgctcaaatcctcggatgttactgaattctcaatcttcttccata
agaaggcatgggtcttcattgccacctccattggagaagtacacaaattcaacagatgaa
attctagaagttaaggcttatctcagtaccgaagctacttctgatactcctttggatgct
tcatacatcagtattcagactatgaataatcaaatcaaagaactacagcaacaaggttct
tctgcagctgctggaatggagatggatcgactaaagcttgattacaaaaagtcttcgcaa
atggtccagcagtggaagaaaatgtatgaaaacttgcacgaattttgtgtaaatgagctt
ttggacggagatcaagcaggtgattgcaatggaaactcaacctga
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