Actinidia eriantha (wild kiwifruit): 130753602
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Entry
130753602 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130753602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130753602
03019 Messenger RNA biogenesis [BR:
aew03019
]
130753602
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130753602
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130753602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
130753602
NCBI-ProteinID:
XP_057463764
LinkDB
All DBs
Position
18:complement(22108494..22125368)
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AA seq
678 aa
AA seq
DB search
MEDGEGGLSFDFEGGLDAGPINPTASVPSVQSEAVATAEPAGINATGRRSFRQTVCRHWL
RGLCMKGDACGFLHQYDKSRMPICRFFRLFGECREQDCVYKHSNEDIKECNMYKLGFCPN
GPDCRYRHAKLPGPPPPVEEVLQKIQQMTSYNYGNSNRFFQNRNGNYSQQTEKSQFPRGP
ITANQGAAGNSSTTESPNMEPQQQVQQSQQQVGQTQIQNLPNGQQNQGNRIATPLPQGIS
RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNDAFDSVENVILIFSVNRTRHFQGCAKM
TSKIVGSVGGGNWKYEHGTAHYGRNFSVKWLKLCELSFHKTRYLRNPFNENLPVKISRDC
QELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPENGTENPDIVPFQDNE
EEEEEEESEEEDESYGQVSGAAAQGRGRGRGMMWPSHMPFARGARPFPGMRGFPPVMDGF
SCGAITPDGFPMPDVFGVGPRPFPPYGPRFPGDFAGPASGMMFHGRPPGSGFGMMMGPGR
APFMGGLGIGAAAAQPRAGRPVGLPPVFPPPSQPTQHSNRPVKRDQRETAYDKNDRYSAG
SEHGKGKELADSGVNDETQHGKGVTTQQEDQFGAGNSLRNDESESEDEAPRRSRHGEGKK
RRRSLEADATGGSGQQVQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgaaggaggtctgagcttcgatttcgagggcggtctcgacgcggggccc
attaaccctacggcgtccgtaccgtcagttcaatctgaagccgtcgcgaccgccgagccc
gcggggatcaacgccacggggcggcggagcttccggcagacggtgtgccggcactggctg
cggggactgtgcatgaagggcgacgcgtgcgggttcctccaccagtacgacaagtcgcgg
atgccaatatgccgcttcttcaggttgttcggggagtgccgcgagcaagattgcgtctat
aagcactccaatgaggacatcaaggagtgtaatatgtataagttgggattttgtccaaat
ggtcctgattgccgctataggcatgcgaagttgcctggccctccacctcctgtagaagaa
gtccttcagaagattcagcaaatgacttcttacaattatggcaactccaacaggttcttt
caaaatcgaaatggtaattattctcaacaaacagaaaaatctcagtttccaagaggccca
attactgccaatcaaggcgcagctggaaattcttcaacaacagagtctcccaatatggag
ccgcagcaacaagttcaacagtctcaacaacaggtcggccagacccaaatacaaaacctt
ccaaatggccagcaaaatcaggggaatagaattgctacaccactgcctcaaggaatatct
aggtattttattgtcaaaagttgcaatcgtgaaaatttggaattatcggtacagcaagga
gtatgggcaactcaaaggagcaatgaggctaaactgaatgatgcttttgattctgtggag
aatgttatcttgatcttttcagtcaaccggacccggcatttccagggttgtgcaaaaatg
acttctaaaattgttggctctgttggtggagggaactggaagtatgaacatggaaccgca
cattatgggaggaatttctctgtcaaatggttaaagctatgtgaattatcttttcacaaa
actcgttatttgaggaacccgtttaatgagaacctaccagtgaagattagcagagattgc
caggagctagagccttctataggtgagcagttggcttcgctgctctaccttgagccagac
agtgaacttatggcaatctcagttgcagcagaatcaaagcgagaggaggaaaaagcgaag
ggagtgaatccggaaaatggtactgagaaccctgatattgtcccatttcaggacaatgaa
gaagaggaagaggaagaagaaagtgaggaggaggacgagagctatggccaagtttctggg
gcagcggctcaaggaagaggaaggggaagggggatgatgtggccttctcacatgcctttt
gcacgtggagccaggccattcccggggatgcgaggctttccccctgttatggatggattt
tcttgtggagccatcacgcccgatggttttccaatgcctgatgtttttggtgtgggccct
cgcccttttcctccctatggtccaagattccctggtgattttgcgggtcccgcatctggc
atgatgtttcacggtcgaccacccggtagtggatttgggatgatgatgggtcccggacga
gcaccttttatgggtgggttgggcattggagctgccgcagcccaaccaagagctggtcgg
ccagttggtttaccgccagtgtttccaccaccatcacagcccacgcaacactcgaaccgc
ccagttaagagggaccagagagaaacagcatatgataagaatgacagatacagcgcaggt
tcagaacatggcaagggcaaagaactggctgattcgggagtaaatgatgagacgcaacac
gggaaaggagtaacgactcaacaagaggatcaatttggtgccggaaacagcttgaggaat
gatgagagcgaaagcgaggatgaagcaccgagaaggtcaagacacggggaggggaagaag
agaaggcgaagtttggaggcggatgctaccggtggctctggtcaacaagtccagtga
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