Actinidia eriantha (wild kiwifruit): 130754209
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Entry
130754209 CDS
T09464
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aew01009
]
130754209
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130754209
03041 Spliceosome [BR:
aew03041
]
130754209
Protein phosphatases and associated proteins [BR:
aew01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130754209
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130754209
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130754209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_PARP14_3
DUF4407
Motif
Other DBs
NCBI-GeneID:
130754209
NCBI-ProteinID:
XP_057464365
LinkDB
All DBs
Position
2:18030281..18041863
Genome browser
AA seq
911 aa
AA seq
DB search
MELKVSSPKAGGLSPSDCVSDPEEKEISDDDDDDRNHKHRRREVQSESMERDSMEQVLIR
PYRKGNRPFENGHLYRENHSQSNETWKSSTMSLLETGLPAKFEKRRSGFATFPRAPNKVY
QPLSADLGSGRCRGRESGSWSQCDPRLSFGDIASQMVPQGSFTPSLFAGRGLPNVSNSQS
PSWSAFGLIPGIPNGGMDTLHSLGMQGSFRTSIGPSLNIGIPRPRCRDFEERGFCLRGDV
CPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTSSALPSVTASSSTFINSKSSKSNRL
GMTDDGLEMNGVFSGSAGASGTDFYDPDQPLWTNDCPETSTAPLGLNSSKVHETKSFLEG
NSSDHHHALFDGFGDECAMMSTATAVGSQSTSSSIWGRISTKRNEMKDKIDCNISSSNYI
ENEARGDQEPLANLQEAACQGKRIVDEDIGSQADSSLKKQGDTGRTGKPSQKALHTVFVN
GIPQKDNRREALLLHFRKFGEVIDIYIPLKSERAFVQFSKREEAEAALKAPDAVMGNRFI
RLWWANRDNIPVDGMGSGNSLSVAPRGVTNVSVPPRLSFGHRGRDNLQSAAPKLGVPNVS
VPAVPSSDQTKPVAINSPRAPPPLQKKQESLELLKEELRKKQELLDKKRNDFRRQLDKLE
KQATGLKGDVSSEPSAKRHNPGTVADVAKAATPRSADTGTVVASPVAKVMAEKDKSMENV
VHQSPKQNTYLTPLEPSSLKHSIRPLAPAGGPFVMSRFKLDNRPTTFKIISPLPTGLANV
AVLKEHFSAYGELSAVELEDVGSSDSVASKNFAAHISFTTRNSAEKAFAKGNCLQGHDLQ
FMWLAPTNSGNDNGVRENPTSAFKIPSDANVQPAGEVAPVDPHKVAASGNGEAEILERKE
SGGECTERNED
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaaagtttcatctccaaaggctgggggtctttcaccttctgattgtgttagt
gatcctgaagagaaagaaatcagtgatgatgatgatgatgatcgtaatcataagcatcgt
agacgggaggtacagtctgagtctatggaaagagatagtatggaacaagttctaataagg
ccttacagaaagggaaacagaccttttgaaaatgggcacctttatcgggaaaaccattct
cagtcaaatgaaacgtggaaaagttctaccatgtcccttctggagacaggcctgcctgct
aagtttgaaaaacgacgctctggctttgccacatttccccgagctccaaacaaggtttat
caaccgttatctgctgatcttggctctggtaggtgtagaggaagggaatctggttcttgg
agccaatgtgaccctaggttaagctttggcgatattgcttctcaaatggttccacaggga
tctttcactccaagtctgtttgcagggagggggttaccaaatgtctcaaactcacaaagc
ccatcctggagtgcgtttggattgattccaggaataccaaatggtggtatggatacactc
cattcccttggtatgcaaggatcgtttagaacatcaattggtccttctctaaatataggt
attccacgtccaagatgtagagactttgaggagcgtggcttttgtctaagaggagacgtg
tgtccaatggagcatggtgtcaatcggattgttgtcgaagatgttcagagcctttcacag
tttaatctccccgtctcacttccaagtgcccacctgctgggaacatcctctgctttgcct
tccgttactgcctcttcgagcacattcataaatagcaagagtagtaaaagtaacaggctt
ggaatgactgatgatggattggagatgaatggtgttttttctggttcagctggtgcaagt
ggaactgatttttatgatcctgatcagcctctgtggactaatgattgtccagaaacttca
actgcaccactaggattaaactcatctaaggttcatgaaactaagtctttcttggaggga
aactcttctgaccatcaccatgcattatttgatggatttggtgatgaatgcgcgatgatg
agcactgcaactgctgttggatctcaaagtacaagttcgtccatctggggaagaattagc
acaaaaagaaatgaaatgaaagataagattgactgtaacataagttcctcaaattatatt
gagaacgaagctaggggagatcaagagccattggccaatcttcaggaagctgcctgtcaa
gggaagcggatcgtagatgaagacatcggctcacaagctgattcatcactaaagaagcaa
ggtgatactgggcgtaccgggaaaccttctcagaaggcgctacatactgtatttgtcaat
ggcattccccaaaaagacaacagaagagaggcccttcttttgcattttcgaaaatttgga
gaggttattgatatttatattccattgaagagtgaacgggcatttgttcagttctctaaa
agggaagaggcagaggctgctctgaaagctcctgatgctgtaatgggtaacaggtttatc
aggctatggtgggctaaccgggacaacattcctgttgatggaatgggtagcggtaacagt
ttatcagtagctcctcgtggggtgacaaatgtttcagttccaccccgtctttcttttggt
cacagaggaagggataatctccaatctgcagctccaaaacttggtgttcccaatgtttcg
gttcctgctgtgccttcctccgaccagactaagcctgtagcgatcaacagtccgagagct
cctcctcctttgcaaaagaagcaggagagtttagagcttttgaaagaggaacttcgtaaa
aagcaggaattgcttgataagaaacgcaatgacttccgtcgtcagttggataaacttgag
aaacaagctacaggtctcaaaggtgacgtatcgtctgagccgtctgcaaagagacataac
ccgggaacagtagctgatgttgcaaaagctgcaactcccaggtctgctgatactggtact
gttgtggcatcaccagttgcaaaagtgatggctgagaaggacaaatctatggagaatgtg
gtgcaccaaagtcccaaacagaatacttatttgacaccgctggagccttcaagcttgaag
cattcaattcgtcctttggcacctgcaggtggaccttttgttatgagtagattcaaattg
gacaaccgtcccaccacctttaaaattatttcacctttaccaaccggccttgcgaatgtt
gctgttttgaaggagcacttctcggcttatggtgaactttctgctgtagagctagaagat
gtggggtctagtgactcagtggcatccaaaaatttcgcggctcatatatcttttaccacg
cgaaattcagccgagaaagcatttgcgaagggtaactgcttgcaaggccacgatttgcag
tttatgtggttggcacctactaattctggaaatgacaacggtgttagagaaaaccccaca
tctgcttttaagataccttcagatgctaacgttcagcctgcaggagaagtcgcacccgtt
gatccccataaagtggctgcctcgggaaatggagaagctgaaattttggaaagaaaagaa
agcggtggggaatgtacagaacggaatgaagattag
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