Actinidia eriantha (wild kiwifruit): 130754473
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Entry
130754473 CDS
T09464
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130754473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130754473
03036 Chromosome and associated proteins [BR:
aew03036
]
130754473
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130754473
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130754473
PBAF complex
130754473
GBAF(ncBAF) complex
130754473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130754473
NCBI-ProteinID:
XP_057464677
LinkDB
All DBs
Position
19:23415448..23417787
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AA seq
549 aa
AA seq
DB search
MSANNNNPVKNSTPFGNSGVTPQSMPVSQQTNLLTQPQPQPQPQPQPHGGSHFQGHFQLS
EPQAQALAQAQYAQAHAQAQAQAAHAHFRSHLQSQNQAFAQLQNSGAGNVGSPSILTPAT
GSAKRPPQKPPSRPPGSVGANTGSPLKTMELTPAARRKKQKLPEKQIPDKVAAILPESAL
YTQLLEFESRVDAALARKKIDIQESIKNPARIQKTLRIYVFNTFSNQMQTVPKNQNAESP
SWSLKIIGRILEDGMDTNAAGMVQKQNSLYPKFSYFFKKVTIYLEQNLYPDNHVILWESA
RSPALHEGFEVKRKGDKEFTAIIRLEMNYMPEKYKLSPALMDVLGIEVETRPRVMAALWH
YVKIRKLQIPSDPSYFMCDPPLRKVFGEDKMKFSMMSQKISPHLTPPQPIHLEHKIKFSG
NNPTGNTCYDVLVDVPVSLQREMSAFLANLEKHKEIDACDEAISAAIKKIHKHRRRWAFF
LGFSQSPAEFINALIASQSRDLKLVAGDASHSAERERQPDFYNHPWVEDAVIRYLNRKST
AGSDAPGST
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaataacaataacccagtgaagaatagcaccccttttggaaattcaggggtg
acaccacaatccatgcctgtgagtcagcaaacaaatttgctcacacagccacagccacag
ccacaaccacaaccacaaccacatggtgggtctcactttcaggggcattttcagctgtct
gagcctcaagctcaagcattggctcaggcacagtatgcccaggctcatgcacaagctcag
gcacaagcggctcacgcacattttcgttctcatttgcaatcccaaaaccaggcctttgct
caattgcaaaattccggggccggtaatgtgggttcgccctcaattctgaccccggccacg
ggaagtgccaagcggccccctcagaagccaccttctcggcctcctggttcagtcggtgcc
aacacgggttcgcctttgaaaactatggagctgacccctgctgctcgaaggaagaagcaa
aagcttcccgagaagcaaattccggataaagtagcggcaattttaccggaatcggctctt
tatactcagctgcttgaattcgagtctcgagttgatgctgcccttgcgaggaagaagatt
gatattcaagaatctattaaaaaccctgcccgcattcagaaaacacttcggatttatgtt
ttcaacactttctcaaaccagatgcaaacagtcccgaagaatcagaatgctgagtcccct
tcttggtcccttaaaataattgggaggatcttggaagatggaatggatactaatgctgct
gggatggtgcagaaacagaactctttgtatccgaaattctcatattttttcaagaaagtc
accatttatttagaacaaaatctctatccagacaaccatgtaattctatgggaaagtgct
cggtcacctgcgcttcatgagggttttgaggtaaaaagaaaaggggataaggaatttact
gcaattataagactggaaatgaattatatgcctgagaaatacaaactttcaccggccttg
atggatgttcttggaattgaggtagaaactcgaccaagggttatggctgcgctctggcat
tatgtgaagattcggaagttgcagattccaagtgatccgtcttacttcatgtgtgatcca
cctcttcgaaaagtgttcggggaagacaagatgaaattttccatgatgtcgcaaaagatc
tcgccacatttaaccccgccgcaacccatacatttggaacataagatcaagttttctggg
aataatccaactgggaatacttgttacgatgtgctggttgatgttccagtgtcgttgcag
agggaaatgtctgctttccttgcaaatttggagaagcacaaggagattgatgcttgtgat
gaagctatttccgctgctataaagaagatccacaaacatcgtcggaggtgggctttcttt
ctagggttcagtcagtctccagcagaatttatcaatgctctgattgcttctcaaagcagg
gatctgaagcttgttgcgggagatgctagtcatagtgcagagagagaacgccagcctgac
ttctacaatcatccgtgggttgaagatgctgtaatacgctatctgaatcgcaaatctact
gccggcagtgacgctcctggaagcacgtag
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